RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 GLO1Q04760 184 aa2.39□□□□□ -2.03
LEMD3-206ENST00000545026 DCXRQ7Z4W1 244 aa2.39□□□□□ -2.03
LEMD3-206ENST00000545026 LRRC28Q86X40 367 aaPredicted RBP2.39□□□□□ -2.03
LEMD3-206ENST00000545026 FAM96AQ9H5X1 160 aa2.39□□□□□ -2.03
LEMD3-206ENST00000545026 PAQR5Q9NXK6 330 aaPredicted RBP2.39□□□□□ -2.03
LEMD3-206ENST00000545026 TIMM9Q9Y5J7 89 aa2.39□□□□□ -2.03
LEMD3-206ENST00000545026 ZFHX2Q9C0A1 2572 aaPredicted RBP2.39□□□□□ -2.03
LEMD3-206ENST00000545026 DOCK10Q96BY6 2186 aa2.39□□□□□ -2.03
LEMD3-206ENST00000545026 CREBL2O60519 120 aaPredicted RBP2.38□□□□□ -2.03
LEMD3-206ENST00000545026 PGLYRP1O75594 196 aaPredicted RBP2.38□□□□□ -2.03
LEMD3-206ENST00000545026 TNNC2P02585 160 aa2.38□□□□□ -2.03
LEMD3-206ENST00000545026 IFNA16P05015 189 aa2.38□□□□□ -2.03
LEMD3-206ENST00000545026 SRP19P09132 144 aaKnown RBP2.38□□□□□ -2.03
LEMD3-206ENST00000545026 FGF6P10767 208 aa2.38□□□□□ -2.03
LEMD3-206ENST00000545026 S100A7P31151 101 aa2.38□□□□□ -2.03
LEMD3-206ENST00000545026 EMP1P54849 157 aa2.38□□□□□ -2.03
LEMD3-206ENST00000545026 TMEM258P61165 79 aa2.38□□□□□ -2.03
LEMD3-206ENST00000545026 IFITM2Q01629 132 aa2.38□□□□□ -2.03
LEMD3-206ENST00000545026 RELAQ04206 551 aa2.38□□□□□ -2.03
LEMD3-206ENST00000545026 HIST2H3PS2Q5TEC6 136 aa2.38□□□□□ -2.03
LEMD3-206ENST00000545026 SYPL2Q5VXT5 272 aa2.38□□□□□ -2.03
LEMD3-206ENST00000545026 ZNF705AQ6ZN79 300 aaPredicted RBP2.38□□□□□ -2.03
LEMD3-206ENST00000545026 RSL24D1Q9UHA3 163 aaKnown RBP2.38□□□□□ -2.03
LEMD3-206ENST00000545026 COL11A1P12107 1806 aaPredicted RBP2.38□□□□□ -2.03
LEMD3-206ENST00000545026 MDC1Q14676 2089 aaKnown RBP2.37□□□□□ -2.03
LEMD3-206ENST00000545026 H7C2G1 150 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 DEFA4P12838 97 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 HAAOP46952 286 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 SPCS3P61009 180 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 SLC38A11Q08AI6 406 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 GUK1Q16774 197 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 KIAA2026Q5HYC2 2103 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 DYNAPQ8N1N2 210 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 IMP4Q96G21 291 aaKnown RBP2.37□□□□□ -2.03
LEMD3-206ENST00000545026 OR8D2Q9GZM6 311 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 NAT8Q9UHE5 227 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 PLB1Q6P1J6 1458 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 GBF1Q92538 1859 aa2.37□□□□□ -2.03
LEMD3-206ENST00000545026 IGHV1-18A0A0C4DH31 117 aa2.36□□□□□ -2.03
LEMD3-206ENST00000545026 SERPINA6P08185 405 aa2.36□□□□□ -2.03
LEMD3-206ENST00000545026 GLT8D1Q68CQ7 371 aa2.36□□□□□ -2.03
LEMD3-206ENST00000545026 Q6ZRN7 208 aaPredicted RBP2.36□□□□□ -2.03
LEMD3-206ENST00000545026 KTN1-AS1Q86SY8 53 aa2.36□□□□□ -2.03
LEMD3-206ENST00000545026 ANKRD7Q92527 254 aa2.36□□□□□ -2.03
LEMD3-206ENST00000545026 SLC7A6Q92536 515 aa2.36□□□□□ -2.03
LEMD3-206ENST00000545026 KLK6Q92876 244 aa2.36□□□□□ -2.03
LEMD3-206ENST00000545026 ZNF625Q96I27 306 aaPredicted RBP2.36□□□□□ -2.03
LEMD3-206ENST00000545026 FUT9Q9Y231 359 aa2.36□□□□□ -2.03
LEMD3-206ENST00000545026 TIMM22Q9Y584 194 aa2.36□□□□□ -2.03
LEMD3-206ENST00000545026 TRAV38-1A0A0B4J264 116 aa2.35□□□□□ -2.03
LEMD3-206ENST00000545026 A0A0J9YY10 115 aa2.35□□□□□ -2.03
LEMD3-206ENST00000545026 A0A1B0GX78 115 aa2.35□□□□□ -2.03
LEMD3-206ENST00000545026 MSNP26038 577 aaKnown RBP2.35□□□□□ -2.03
LEMD3-206ENST00000545026 HLA-DMBP28068 263 aa2.35□□□□□ -2.03
LEMD3-206ENST00000545026 SULT1A1P50225 295 aa2.35□□□□□ -2.03
LEMD3-206ENST00000545026 RGS21Q2M5E4 152 aa2.35□□□□□ -2.03
LEMD3-206ENST00000545026 ERMAPQ96PL5 475 aaPredicted RBP2.35□□□□□ -2.03
LEMD3-206ENST00000545026 CISHQ9NSE2 258 aa2.35□□□□□ -2.03
LEMD3-206ENST00000545026 CMTM6Q9NX76 183 aa2.35□□□□□ -2.03
LEMD3-206ENST00000545026 E2F6O75461 281 aa2.34□□□□□ -2.03
LEMD3-206ENST00000545026 LYPLA2O95372 231 aa2.34□□□□□ -2.03
LEMD3-206ENST00000545026 PPBPP02775 128 aa2.34□□□□□ -2.03
LEMD3-206ENST00000545026 ZNF705DP0CH99 300 aaPredicted RBP2.34□□□□□ -2.03
LEMD3-206ENST00000545026 EVX1P49640 407 aa2.34□□□□□ -2.03
LEMD3-206ENST00000545026 RPP25LQ8N5L8 163 aaKnown RBP2.34□□□□□ -2.03
LEMD3-206ENST00000545026 OR8B12Q8NGG6 310 aa2.34□□□□□ -2.03
LEMD3-206ENST00000545026 ACOT12Q8WYK0 555 aa2.34□□□□□ -2.03
LEMD3-206ENST00000545026 CCDC42Q96M95 316 aa2.34□□□□□ -2.03
LEMD3-206ENST00000545026 DOHHQ9BU89 302 aa2.34□□□□□ -2.03
LEMD3-206ENST00000545026 FLT4P35916 1363 aa2.34□□□□□ -2.04
LEMD3-206ENST00000545026 CHP2O43745 196 aa2.33□□□□□ -2.04
LEMD3-206ENST00000545026 NAPSAO96009 420 aa2.33□□□□□ -2.04
LEMD3-206ENST00000545026 C1QCP02747 245 aa2.33□□□□□ -2.04
LEMD3-206ENST00000545026 GRK1Q15835 563 aa2.33□□□□□ -2.04
LEMD3-206ENST00000545026 TMEM42Q69YG0 159 aa2.33□□□□□ -2.04
LEMD3-206ENST00000545026 CHST6Q9GZX3 395 aa2.33□□□□□ -2.04
LEMD3-206ENST00000545026 EFCAB1Q9HAE3 211 aa2.33□□□□□ -2.04
LEMD3-206ENST00000545026 MALRD1Q5VYJ5 2156 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 TRBV20OR9-2A0A075B6H5 130 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 A0A0D9SEW6 157 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 HMSDA8MTL9 139 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 NOS1APO75052 506 aaPredicted RBP2.32□□□□□ -2.04
LEMD3-206ENST00000545026 C1QAP02745 245 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 SERPINA7P05543 415 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 MSMBP08118 114 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 RPS17P08708 135 aaKnown RBP2.32□□□□□ -2.04
LEMD3-206ENST00000545026 HIST1H4AP62805 103 aaKnown RBP2.32□□□□□ -2.04
LEMD3-206ENST00000545026 C9orf64Q5T6V5 341 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 OR52E6Q96RD3 313 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 IL36BQ9NZH7 164 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 VPS29Q9UBQ0 182 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 FN1P02751 2386 aaKnown RBP2.32□□□□□ -2.04
LEMD3-206ENST00000545026 DISP1Q96F81 1524 aa2.32□□□□□ -2.04
LEMD3-206ENST00000545026 ITGB4P16144 1822 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 SIGLEC16A6NMB1 481 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 TRAPPC2LH3BP13 241 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 IGHV3-7P01780 117 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 CD79AP11912 226 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 CEBPGP53567 150 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 RPL18Q07020 188 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms