RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 NKX6-2Q9C056 277 aaPredicted RBP3.17□□□□□ -1.9
C11orf54-213ENST00000533585 EFCAB1Q9HAE3 211 aa3.17□□□□□ -1.9
C11orf54-213ENST00000533585 CKLFQ9UBR5 152 aa3.17□□□□□ -1.9
C11orf54-213ENST00000533585 SCN10AQ9Y5Y9 1956 aa3.17□□□□□ -1.9
C11orf54-213ENST00000533585 TSPOAP1O95153 1857 aa3.17□□□□□ -1.9
C11orf54-213ENST00000533585 OVOS2A0A0J9YW53 1432 aa3.17□□□□□ -1.9
C11orf54-213ENST00000533585 OVOS2Q6IE36 1432 aa3.17□□□□□ -1.9
C11orf54-213ENST00000533585 NEO1Q92859 1461 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 TET2Q6N021 2002 aaPredicted RBP3.16□□□□□ -1.9
C11orf54-213ENST00000533585 IGHV3-21A0A0B4J1V1 117 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 TRAV5A0A0B4J249 113 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 TRAV41A0A0B4J266 112 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 TRDV1A0A1B0GX56 115 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 TMEM223A0PJW6 202 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 NKX2-6A6NCS4 301 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 K7ERU9 68 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 CD28P10747 220 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 EVI2AP22794 236 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 HIST1H2BOP23527 126 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 HIST1H2BBP33778 126 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 KLF3P57682 345 aaPredicted RBP3.16□□□□□ -1.9
C11orf54-213ENST00000533585 HIST1H2BDP58876 126 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 HIST1H2BCP62807 126 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 EMX2Q04743 252 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 HIST2H2BEQ16778 126 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.16□□□□□ -1.9
C11orf54-213ENST00000533585 DNLZQ5SXM8 178 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 RASL11AQ6T310 242 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 NTM-AS1Q6ZSK4 140 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 AMN1Q8IY45 258 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 PACRGLQ8N7B6 248 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.16□□□□□ -1.9
C11orf54-213ENST00000533585 SLC30A7Q8NEW0 376 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 OR51T1Q8NGJ9 327 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 TYMSOSQ8TAI1 123 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 HIST1H2BHQ93079 126 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 BORCS8Q96FH0 119 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 NARS2Q96I59 477 aaKnown RBP3.16□□□□□ -1.9
C11orf54-213ENST00000533585 HIST1H2BNQ99877 126 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 HIST1H2BMQ99879 126 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 B9D2Q9BPU9 175 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 TM2D3Q9BRN9 247 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 PYGO2Q9BRQ0 406 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 RTL8AQ9BWD3 113 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 C1QTNF6Q9BXI9 259 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 KRTAP4-7Q9BYR0 210 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 ZNRD1Q9P1U0 126 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 GNG8Q9UK08 70 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 CELA1Q9UNI1 258 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 PIKFYVEQ9Y2I7 2098 aa3.16□□□□□ -1.9
C11orf54-213ENST00000533585 BAZ1AQ9NRL2 1556 aaPredicted RBP3.16□□□□□ -1.9
C11orf54-213ENST00000533585 RIMS1Q86UR5 1692 aaKnown RBP3.15□□□□□ -1.9
C11orf54-213ENST00000533585 A0A087WUU8 490 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 TRAV38-1A0A0B4J264 116 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 IGHV1-3A0A0C4DH29 117 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 IGHV3-64DA0A0J9YX35 117 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 A0A1B0GW54 56 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 LEUTXA8MZ59 168 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 OVOL1O14753 267 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 SCTP09683 121 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 OR5AC1P0C628 307 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 LINC00869P0C866 280 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 PTHLHP12272 177 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 ZNF25P17030 456 aaPredicted RBP3.15□□□□□ -1.91
C11orf54-213ENST00000533585 IL1RNP18510 177 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 TGFBR1P36897 503 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 AKR1C2P52895 323 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 TAS2R30P59541 319 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 NANOS3P60323 173 aaKnown RBP3.15□□□□□ -1.91
C11orf54-213ENST00000533585 PLCXD2Q0VAA5 305 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 SYCNQ0VAF6 134 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 HNRNPA0Q13151 305 aaKnown RBP3.15□□□□□ -1.91
C11orf54-213ENST00000533585 IL17AQ16552 155 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 RTL8BQ17RB0 113 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 RPL22L1Q6P5R6 122 aaKnown RBP3.15□□□□□ -1.91
C11orf54-213ENST00000533585 SLC25A34Q6PIV7 304 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 LCA10Q71F78 164 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 SSX8Q7RTT4 187 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 CD177Q8N6Q3 437 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 DAND5Q8N907 189 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 OR11G2Q8NGC1 345 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 OR4C16Q8NGL9 310 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 CIRBP-AS1Q8TBR5 109 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 H1FXQ92522 213 aaKnown RBP3.15□□□□□ -1.91
C11orf54-213ENST00000533585 ARL11Q969Q4 196 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 GPX7Q96SL4 187 aaPredicted RBP3.15□□□□□ -1.91
C11orf54-213ENST00000533585 SLC25A21Q9BQT8 299 aaPredicted RBP3.15□□□□□ -1.91
C11orf54-213ENST00000533585 ZNF222Q9UK12 451 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 ERG28Q9UKR5 140 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 PHLDA3Q9Y5J5 127 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 OVOS2A0A0G2JMS6 1433 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 MRC2Q9UBG0 1479 aa3.15□□□□□ -1.91
C11orf54-213ENST00000533585 MYH10P35580 1976 aa3.14□□□□□ -1.91
C11orf54-213ENST00000533585 SCN2AQ99250 2005 aa3.14□□□□□ -1.91
C11orf54-213ENST00000533585 CEP170Q5SW79 1584 aa3.14□□□□□ -1.91
C11orf54-213ENST00000533585 DHRS12A0PJE2 317 aa3.14□□□□□ -1.91
C11orf54-213ENST00000533585 FAM168BA1KXE4 195 aa3.14□□□□□ -1.91
C11orf54-213ENST00000533585 FAM92AA1XBS5 289 aa3.14□□□□□ -1.91
C11orf54-213ENST00000533585 C11orf94C9JXX5 98 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms