RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ZBTB34Q8NCN2 500 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 OR4A5Q8NH83 315 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 SLC25A38Q96DW6 304 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 WDR89Q96FK6 387 aaPredicted RBP13.45□□□□□ -0.26
PCF11-206ENST00000533018 FANCD2OSQ96PS1 177 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 FAM110AQ9BQ89 295 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 WFDC10AQ9H1F0 79 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 SRD5A3Q9H8P0 318 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 DMRT1Q9Y5R6 373 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 MEIS3P1A6NDR6 274 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 LGALS9O00182 355 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 CTRB1P17538 263 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 CBLN1P23435 193 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 TIMM50Q3ZCQ8 353 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 CTRB2Q6GPI1 263 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 GPHB5Q86YW7 130 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 CACNG8Q8WXS5 425 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 CCDC140Q96MF4 163 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 ZC4H2Q9NQZ6 224 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 BET1LQ9NYM9 111 aa13.44□□□□□ -0.26
PCF11-206ENST00000533018 A0A0A6YYH2 397 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 A6NJ64 397 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 CLEC3BP05452 202 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 MSMO1Q15800 293 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 ZNF57Q68EA5 555 aaPredicted RBP13.43□□□□□ -0.26
PCF11-206ENST00000533018 SLC16A13Q7RTY0 426 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 TMEM17Q86X19 198 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 DMBX1Q8NFW5 382 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 OR51H1Q8NH63 302 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 COMMD5Q9GZQ3 224 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 HIPK2Q9H2X6 1198 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 AUNIPQ9H7T9 357 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 IFT46Q9NQC8 304 aa13.43□□□□□ -0.26
PCF11-206ENST00000533018 TRBV7-1A0A0A6YYK4 115 aa13.42□□□□□ -0.26
PCF11-206ENST00000533018 HPRT1P00492 218 aa13.42□□□□□ -0.26
PCF11-206ENST00000533018 NQO2P16083 231 aa13.42□□□□□ -0.26
PCF11-206ENST00000533018 CBX5P45973 191 aa13.42□□□□□ -0.26
PCF11-206ENST00000533018 TAS2R31P59538 309 aa13.42□□□□□ -0.26
PCF11-206ENST00000533018 AADACL3Q5VUY0 350 aa13.42□□□□□ -0.26
PCF11-206ENST00000533018 ZNF818PQ6ZRF7 136 aa13.42□□□□□ -0.26
PCF11-206ENST00000533018 OR5AP2Q8NGF4 316 aa13.42□□□□□ -0.26
PCF11-206ENST00000533018 CXorf58Q96LI9 332 aa13.42□□□□□ -0.26
PCF11-206ENST00000533018 EPPK1P58107 5090 aaKnown RBP13.42□□□□□ -0.26
PCF11-206ENST00000533018 RBMY1BA6NDE4 496 aaKnown RBP13.41□□□□□ -0.26
PCF11-206ENST00000533018 RBMY1EA6NEQ0 496 aaKnown RBP13.41□□□□□ -0.26
PCF11-206ENST00000533018 MFSD2BA6NFX1 497 aa13.41□□□□□ -0.26
PCF11-206ENST00000533018 RBFOX2O43251 390 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCF11-206ENST00000533018 RBMY1DP0C7P1 496 aaKnown RBP13.41□□□□□ -0.26
PCF11-206ENST00000533018 RPA2P15927 270 aa13.41□□□□□ -0.26
PCF11-206ENST00000533018 OR2B8PP59922 312 aa13.41□□□□□ -0.26
PCF11-206ENST00000533018 HERV-K104P61576 105 aa13.41□□□□□ -0.26
PCF11-206ENST00000533018 LINC00322Q6ZN03 302 aaPredicted RBP13.41□□□□□ -0.26
PCF11-206ENST00000533018 UXS1Q8NBZ7 420 aa13.41□□□□□ -0.26
PCF11-206ENST00000533018 GIMAP1Q8WWP7 306 aa13.41□□□□□ -0.26
PCF11-206ENST00000533018 THYN1Q9P016 225 aa13.41□□□□□ -0.26
PCF11-206ENST00000533018 HYDINQ4G0P3 5121 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 IGLV11-55A0A075B6I3 123 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 TRAV3A0A0B4J244 114 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 CGB1A6NKQ9 187 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 UPK2O00526 184 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 SCAF4O95104 1147 aaKnown RBP13.4□□□□□ -0.26
PCF11-206ENST00000533018 TMEM61Q8N0U2 210 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 OR52B4Q8NGK2 314 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 IL17DQ8TAD2 202 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 CD300LFQ8TDQ1 290 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 S100A16Q96FQ6 103 aaKnown RBP13.4□□□□□ -0.26
PCF11-206ENST00000533018 TMEM140Q9NV12 185 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 EHFQ9NZC4 300 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 MLXQ9UH92 298 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 DNAH1Q9P2D7 4330 aa13.4□□□□□ -0.26
PCF11-206ENST00000533018 IGHV3-35A0A0C4DH35 117 aa13.39□□□□□ -0.27
PCF11-206ENST00000533018 TMEM213A2RRL7 107 aa13.39□□□□□ -0.27
PCF11-206ENST00000533018 CYB5BO43169 146 aa13.39□□□□□ -0.27
PCF11-206ENST00000533018 S1PR2O95136 353 aa13.39□□□□□ -0.27
PCF11-206ENST00000533018 GPR183P32249 361 aa13.39□□□□□ -0.27
PCF11-206ENST00000533018 ERVK-16P61578 105 aa13.39□□□□□ -0.27
PCF11-206ENST00000533018 TM4SF20Q53R12 229 aa13.39□□□□□ -0.27
PCF11-206ENST00000533018 PLET1Q6UQ28 207 aa13.39□□□□□ -0.27
PCF11-206ENST00000533018 BTNL8Q6UX41 500 aa13.39□□□□□ -0.27
PCF11-206ENST00000533018 BORCS5Q969J3 196 aa13.39□□□□□ -0.27
PCF11-206ENST00000533018 A8MWP6 167 aa13.38□□□□□ -0.27
PCF11-206ENST00000533018 XRCC3O43542 346 aa13.38□□□□□ -0.27
PCF11-206ENST00000533018 TGFBR1P36897 503 aa13.38□□□□□ -0.27
PCF11-206ENST00000533018 RFX2P48378 723 aa13.38□□□□□ -0.27
PCF11-206ENST00000533018 ANKRD55Q3KP44 614 aa13.38□□□□□ -0.27
PCF11-206ENST00000533018 ZNF585BQ52M93 769 aa13.38□□□□□ -0.27
PCF11-206ENST00000533018 RBPMS2Q6ZRY4 209 aaKnown RBP13.38□□□□□ -0.27
PCF11-206ENST00000533018 OR10W1Q8NGF6 305 aa13.38□□□□□ -0.27
PCF11-206ENST00000533018 ZNF2Q9BSG1 426 aaPredicted RBP13.38□□□□□ -0.27
PCF11-206ENST00000533018 HINT2Q9BX68 163 aa13.38□□□□□ -0.27
PCF11-206ENST00000533018 QTRT1Q9BXR0 403 aaKnown RBP13.38□□□□□ -0.27
PCF11-206ENST00000533018 PLEKHA2Q9HB19 425 aa13.38□□□□□ -0.27
PCF11-206ENST00000533018 IGLC7A0M8Q6 106 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 PMP2P02689 132 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 RLN1P04808 185 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 GNRHRP30968 328 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 POU2AF1Q16633 256 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 KLK9Q2XQG4 91 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 TMEM69Q5SWH9 247 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms