RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 AUNIPQ9H7T9 357 aa12.69□□□□□ -0.38
CPSF1-207ENST00000531727 DIABLOQ9NR28 239 aa12.69□□□□□ -0.38
CPSF1-207ENST00000531727 GAR1Q9NY12 217 aaKnown RBP12.69□□□□□ -0.38
CPSF1-207ENST00000531727 S4R3C0 116 aa12.69□□□□□ -0.38
CPSF1-207ENST00000531727 CGB1A6NKQ9 187 aa12.68□□□□□ -0.38
CPSF1-207ENST00000531727 SULT1C2O00338 296 aa12.68□□□□□ -0.38
CPSF1-207ENST00000531727 REG1AP05451 166 aa12.68□□□□□ -0.38
CPSF1-207ENST00000531727 CBX5P45973 191 aa12.68□□□□□ -0.38
CPSF1-207ENST00000531727 TAS2R31P59538 309 aa12.68□□□□□ -0.38
CPSF1-207ENST00000531727 CATR1Q13166 79 aa12.68□□□□□ -0.38
CPSF1-207ENST00000531727 GUCA2BQ16661 112 aa12.68□□□□□ -0.38
CPSF1-207ENST00000531727 HIPK2Q9H2X6 1198 aa12.68□□□□□ -0.38
CPSF1-207ENST00000531727 HRASLSQ9HDD0 168 aa12.68□□□□□ -0.38
CPSF1-207ENST00000531727 SACSQ9NZJ4 4579 aa12.68□□□□□ -0.38
CPSF1-207ENST00000531727 IGLV11-55A0A075B6I3 123 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 TMEM127O75204 238 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 HPRT1P00492 218 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 FCER2P06734 321 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 DEFA4P12838 97 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 NQO2P16083 231 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 CBLN1P23435 193 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 FXYD4P59646 89 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 OR2B8PP59922 312 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 NEDD8Q15843 81 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 FAM106AQ4KMX7 169 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 DEFB125Q8N687 156 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 OR5AP2Q8NGF4 316 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 GIMAP1Q8WWP7 306 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 CACNG8Q8WXS5 425 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 WDR89Q96FK6 387 aaPredicted RBP12.67□□□□□ -0.38
CPSF1-207ENST00000531727 WFDC10AQ9H1F0 79 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 RETNQ9HD89 108 aa12.67□□□□□ -0.38
CPSF1-207ENST00000531727 TRBV7-1A0A0A6YYK4 115 aa12.66□□□□□ -0.38
CPSF1-207ENST00000531727 TMEM213A2RRL7 107 aa12.66□□□□□ -0.38
CPSF1-207ENST00000531727 RBMY1BA6NDE4 496 aaKnown RBP12.66□□□□□ -0.38
CPSF1-207ENST00000531727 RBMY1EA6NEQ0 496 aaKnown RBP12.66□□□□□ -0.38
CPSF1-207ENST00000531727 A8MWP6 167 aa12.66□□□□□ -0.38
CPSF1-207ENST00000531727 OR11H12B2RN74 326 aa12.66□□□□□ -0.38
CPSF1-207ENST00000531727 RBMY1DP0C7P1 496 aaKnown RBP12.66□□□□□ -0.38
CPSF1-207ENST00000531727 ZNF818PQ6ZRF7 136 aa12.66□□□□□ -0.38
CPSF1-207ENST00000531727 CXorf58Q96LI9 332 aa12.66□□□□□ -0.38
CPSF1-207ENST00000531727 SRD5A3Q9H8P0 318 aa12.66□□□□□ -0.38
CPSF1-207ENST00000531727 TRAV3A0A0B4J244 114 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 IGLC7A0M8Q6 106 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 ZNF320A2RRD8 509 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 MEIS3P1A6NDR6 274 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 MFSD2BA6NFX1 497 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 UPK2O00526 184 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 XRCC3O43542 346 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 FGF2P09038 288 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 TMEM17Q86X19 198 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 OR51H1Q8NH63 302 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 CD300LFQ8TDQ1 290 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 FAM110AQ9BQ89 295 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 SRSF8Q9BRL6 282 aaKnown RBP12.65□□□□□ -0.38
CPSF1-207ENST00000531727 COMMD5Q9GZQ3 224 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 MLXQ9UH92 298 aa12.65□□□□□ -0.38
CPSF1-207ENST00000531727 S1PR2O95136 353 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 HERV-K104P61576 105 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 KCTD21Q4G0X4 260 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 ZNF57Q68EA5 555 aaPredicted RBP12.64□□□□□ -0.39
CPSF1-207ENST00000531727 SLC16A13Q7RTY0 426 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 CROCCP3Q8IVE0 287 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 TMEM61Q8N0U2 210 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 UXS1Q8NBZ7 420 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 BORCS5Q969J3 196 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 PLEKHA2Q9HB19 425 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 IFT46Q9NQC8 304 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 TMEM140Q9NV12 185 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 COMMD9Q9P000 198 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 SELENOKQ9Y6D0 94 aa12.64□□□□□ -0.39
CPSF1-207ENST00000531727 CLEC3BP05452 202 aa12.63□□□□□ -0.39
CPSF1-207ENST00000531727 GNRHRP30968 328 aa12.63□□□□□ -0.39
CPSF1-207ENST00000531727 AADACL3Q5VUY0 350 aa12.63□□□□□ -0.39
CPSF1-207ENST00000531727 DMBX1Q8NFW5 382 aa12.63□□□□□ -0.39
CPSF1-207ENST00000531727 ZNF502Q8TBZ5 544 aa12.63□□□□□ -0.39
CPSF1-207ENST00000531727 S100A16Q96FQ6 103 aaKnown RBP12.63□□□□□ -0.39
CPSF1-207ENST00000531727 QTRT1Q9BXR0 403 aaKnown RBP12.63□□□□□ -0.39
CPSF1-207ENST00000531727 EHFQ9NZC4 300 aa12.63□□□□□ -0.39
CPSF1-207ENST00000531727 THYN1Q9P016 225 aa12.63□□□□□ -0.39
CPSF1-207ENST00000531727 ANAPC10Q9UM13 185 aa12.63□□□□□ -0.39
CPSF1-207ENST00000531727 DNAH1Q9P2D7 4330 aa12.62□□□□□ -0.39
CPSF1-207ENST00000531727 GPR183P32249 361 aa12.62□□□□□ -0.39
CPSF1-207ENST00000531727 TGFBR1P36897 503 aa12.62□□□□□ -0.39
CPSF1-207ENST00000531727 TM4SF20Q53R12 229 aa12.62□□□□□ -0.39
CPSF1-207ENST00000531727 UBE2NLQ5JXB2 153 aa12.62□□□□□ -0.39
CPSF1-207ENST00000531727 THOC7Q6I9Y2 204 aaKnown RBP12.62□□□□□ -0.39
CPSF1-207ENST00000531727 DHRS11Q6UWP2 260 aa12.62□□□□□ -0.39
CPSF1-207ENST00000531727 UNQ9165/PRO28630Q6UXU0 137 aa12.62□□□□□ -0.39
CPSF1-207ENST00000531727 IL17DQ8TAD2 202 aa12.62□□□□□ -0.39
CPSF1-207ENST00000531727 MARC2Q969Z3 335 aa12.62□□□□□ -0.39
CPSF1-207ENST00000531727 CYB5BO43169 146 aa12.61□□□□□ -0.39
CPSF1-207ENST00000531727 RPA2P15927 270 aa12.61□□□□□ -0.39
CPSF1-207ENST00000531727 PTBP1P26599 531 aaKnown RBP eCLIP12.61□□□□□ -0.39
CPSF1-207ENST00000531727 RFX2P48378 723 aa12.61□□□□□ -0.39
CPSF1-207ENST00000531727 BTNL8Q6UX41 500 aa12.61□□□□□ -0.39
CPSF1-207ENST00000531727 GDPD1Q8N9F7 314 aa12.61□□□□□ -0.39
CPSF1-207ENST00000531727 OR10W1Q8NGF6 305 aa12.61□□□□□ -0.39
CPSF1-207ENST00000531727 OR52B4Q8NGK2 314 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms