RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ZNF45Q02386 682 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 C19orf54Q5BKX5 351 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 FAM209BQ5JX69 171 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 LCNL1Q6ZST4 164 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 HSD17B13Q7Z5P4 300 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 FAM223AQ8IWN6 122 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 SGPP2Q8IWX5 399 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZNF491Q8N8L2 437 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 OR5T1Q8NG75 326 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 OR4A16Q8NH70 328 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 RRNAD1Q96FB5 475 aaKnown RBP4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 RCC1LQ96I51 464 aaKnown RBP4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 MS4A10Q96PG2 267 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 OR5B12Q96R08 314 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 SOSTQ9BQB4 213 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 SRSF8Q9BRL6 282 aaKnown RBP4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 HINT2Q9BX68 163 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 QTRT1Q9BXR0 403 aaKnown RBP4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZMAT5Q9UDW3 170 aaKnown RBP4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZNF257Q9Y2Q1 563 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 KCNIP3Q9Y2W7 256 aa4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 TET2Q6N021 2002 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P40-201ENST00000525121 NAP1L6A6NFF2 107 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 NPIPB5A8MRT5 1133 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 SOX15O60248 233 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 BRI3O95415 125 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 LGALS1P09382 135 aaKnown RBP4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 ZNF735P0CB33 412 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 TRAPPC2P0DI81 140 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 TRAPPC2BP0DI82 140 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 EGR2P11161 476 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 HIST1H1BP16401 226 aaKnown RBP4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 AKR1C4P17516 323 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 BRWD1-AS2P59051 145 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR2B8PP59922 312 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 RUNX1Q01196 453 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 ATP5G2Q06055 141 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 ZNF616Q08AN1 781 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 KLF9Q13886 244 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 RBMS2Q15434 407 aaKnown RBP4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 ZNF79Q15937 498 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 DEFB136Q30KP8 78 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 C10orf55Q5SWW7 151 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 FOXB2Q5VYV0 432 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 LINC00299Q6ZSB3 139 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 TMED4Q7Z7H5 227 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 CADM3Q8N126 398 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 NECAP1Q8NC96 275 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 ADAD2Q8NCV1 583 aaKnown RBP4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR11H1Q8NG94 326 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR1L8Q8NGR8 309 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR1N2Q8NGR9 330 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR5B3Q8NH48 314 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 MYOZ3Q8TDC0 251 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 CASTOR1Q8WTX7 329 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 S100ZQ8WXG8 99 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 LSM10Q969L4 123 aaKnown RBP4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 TRIM63Q969Q1 353 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 MRGPRFQ96AM1 343 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 RAX2Q96IS3 184 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 USMG5Q96IX5 58 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 TMEM56Q96MV1 263 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 SLC25A21Q9BQT8 299 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 C7orf50Q9BRJ6 194 aaKnown RBP4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 SRRQ9GZT4 340 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 KLK15Q9H2R5 256 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 NAA60Q9H7X0 242 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 ENY2Q9NPA8 101 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 PTTG2Q9NZH5 202 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 THYN1Q9P016 225 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 CACFD1Q9UGQ2 172 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR51B2Q9Y5P1 312 aa4.21□□□□□ -1.74
HMGB1P40-201ENST00000525121 LINC00854A0A1B0GVQ3 168 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 HMX3A6NHT5 357 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 CRYM-AS1A6NIL9 109 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 C15orf61A6NNL5 157 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 TEX22C9J3V5 150 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 LINC01619G3V211 115 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 IFNA17P01571 189 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 IGHV3-11P01762 117 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 HSPB1P04792 205 aaKnown RBP4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR5AC1P0C628 307 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 ZP3P21754 424 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 VAMP1P23763 118 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 UCP1P25874 307 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 PSMB6P28072 239 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 SSBP2P81877 361 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 RHOGP84095 191 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 EXOSC2Q13868 293 aaKnown RBP4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 TATDN3Q17R31 274 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 CNPY1Q3B7I2 92 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 SP6Q3SY56 376 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 ZNF585BQ52M93 769 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 ASPHD1Q5U4P2 390 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 TMEM268Q5VZI3 342 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 C18orf65Q6ZTR6 163 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 FAM219AQ8IW50 185 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 CENPSQ8N2Z9 138 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 TTC9CQ8N5M4 171 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 SLC35G3Q8N808 338 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 907.2 ms