RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	INMT-MINDY4	F8WBC2	141 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636		J3QRE1	110 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	SYNGR1	O43759	233 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	CXCL13	O43927	109 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	SOX15	O60248	233 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	SS18L1	O75177	396 aa	Predicted RBP	4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF780A	O75290	641 aa	Predicted RBP	4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	S1PR2	O95136	353 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	NDUFB8	O95169	186 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	NDUFB2	O95178	105 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	MT-CO2	P00403	227 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	IGF2	P01344	180 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	HLA-DQB1	P01920	261 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR10J4	P0C629	311 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	MUC1	P15941	1255 aa	Predicted RBP	4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	RAB3B	P20337	219 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	RPS4Y1	P22090	263 aa	Known RBP	4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	CXCR1	P25024	350 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	F2R	P25116	425 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	S100G	P29377	79 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	AKR1C3	P42330	323 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	RFX2	P48378	723 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	FBXW4	P57775	412 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	RAB2A	P61019	212 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	EGFEM1P	Q0D2K5	195 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	GNMT	Q14749	295 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF79	Q15937	498 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	LRRC75B	Q2VPJ9	315 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	TRMT12	Q53H54	448 aa	Known RBP	4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	CLLU1	Q5K131	121 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	ATAD3C	Q5T2N8	411 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	FBXW9	Q5XUX1	488 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	RPL22L1	Q6P5R6	122 aa	Known RBP	4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	CNIH2	Q6PI25	160 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	SKA3	Q8IX90	412 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR4N5	Q8IXE1	308 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	DND1	Q8IYX4	353 aa	Known RBP	4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	TCTE3	Q8IZS6	198 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	CA13	Q8N1Q1	262 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	TEX29	Q8N6K0	151 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	C15orf54	Q8N8G6	183 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF485	Q8NCK3	441 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR2Z1	Q8NG97	314 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR8D4	Q8NGM9	314 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF502	Q8TBZ5	544 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	DOK4	Q8TEW6	326 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	HYLS1	Q96M11	299 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	OXGR1	Q96P68	337 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	SIGMAR1	Q99720	223 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	PRSS27	Q9BQR3	290 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	FKRP	Q9H9S5	495 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	FAM206A	Q9NX38	181 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636		Q9UF83	564 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	SCP2D1	Q9UJQ7	156 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	TP53TG1	Q9Y2A0	90 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	AMDHD2	Q9Y303	409 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	HSPB11	Q9Y547	144 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	PKHD1L1	Q86WI1	4243 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	TMEM272	A0A1B0GTI8	110 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	NAP1L6	A6NFF2	107 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	DHRS7C	A6NNS2	312 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	C17orf51	A8MQB3	221 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636		I3L521	148 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636		J3QLW9	94 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	GPR31	O00270	319 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	PLA2G10	O15496	165 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF432	O94892	652 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	IFNA1	P01562	189 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ADRA2A	P08913	450 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	FOLR2	P14207	255 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF19	P17023	458 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	RPL12	P30050	165 aa	Known RBP	4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	S100A7	P31151	101 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	S100A11	P31949	105 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	SULT1A1	P50225	295 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	SULT1A2	P50226	295 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	PKIA	P61925	76 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	GNG3	P63215	75 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	MRPS10	P82664	201 aa	Known RBP	4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	HOXC5	Q00444	222 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF155	Q12901	538 aa	Predicted RBP	4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	UNC119	Q13432	240 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR5I1	Q13606	314 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	MPPED2	Q15777	294 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF141	Q15928	474 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	SMIM21	Q3B7S5	101 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF585B	Q52M93	769 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	TCTEX1D4	Q5JR98	221 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	MRPL2	Q5T653	305 aa	Known RBP	4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	LPCAT3	Q6P1A2	487 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ARL9	Q6T311	187 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ATRAID	Q6UW56	229 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	GRINA	Q7Z429	371 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	HMGN2P46	Q86SG4	172 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ARRDC1	Q8N5I2	433 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF283	Q8N7M2	679 aa		4.05	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF676	Q8N7Q3	588 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms