RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 DTD1Q8TEA8 209 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 RNASE6Q93091 150 aaKnown RBP15.15■□□□□ 0.02
SDC2-202ENST00000518385 SLC25A22Q9H936 323 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 LY96Q9Y6Y9 160 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 NBASA2RRP1 2371 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 C11orf94C9JXX5 98 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 C3orf80F5H4A9 247 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 M0R143 59 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 TCAPO15273 167 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 RNF224P0DH78 156 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 ZNF16P17020 682 aaPredicted RBP15.15■□□□□ 0.02
SDC2-202ENST00000518385 YPEL3P61236 119 aaPredicted RBP15.15■□□□□ 0.02
SDC2-202ENST00000518385 RPL15P61313 204 aaKnown RBP15.15■□□□□ 0.02
SDC2-202ENST00000518385 OR8G2PQ6IF36 304 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 VHLLQ6RSH7 139 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 Q8TCH9 128 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 MISP3Q96FF7 219 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 WFIKKN1Q96NZ8 548 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 FUT9Q9Y231 359 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 WDR83OSQ9Y284 106 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 PXMP4Q9Y6I8 212 aa15.15■□□□□ 0.02
SDC2-202ENST00000518385 FAM90A27PA6NNH2 459 aa15.14■□□□□ 0.01
SDC2-202ENST00000518385 ZNF705GA8MUZ8 300 aaPredicted RBP15.14■□□□□ 0.01
SDC2-202ENST00000518385 ESDP10768 282 aa15.14■□□□□ 0.01
SDC2-202ENST00000518385 NDUFB7P17568 137 aa15.14■□□□□ 0.01
SDC2-202ENST00000518385 CEBPDP49716 269 aaPredicted RBP15.14■□□□□ 0.01
SDC2-202ENST00000518385 C5orf24Q7Z6I8 188 aa15.14■□□□□ 0.01
SDC2-202ENST00000518385 GCSAMQ8N6F7 178 aa15.14■□□□□ 0.01
SDC2-202ENST00000518385 HSD17B10Q99714 261 aaKnown RBP15.14■□□□□ 0.01
SDC2-202ENST00000518385 FKBP11Q9NYL4 201 aa15.14■□□□□ 0.01
SDC2-202ENST00000518385 MGST3O14880 152 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 SPRY3O43610 288 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 CD55P08174 381 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 SELLP14151 372 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 UQCRFS1P47985 274 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 AESQ08117 197 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 COX19Q49B96 90 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 LINC01551Q86U37 167 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 WFDC8Q8IUA0 241 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 FAM222BQ8WU58 562 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 R3HDM4Q96D70 268 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 COQ2Q96H96 371 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 BBC3Q96PG8 261 aaPredicted RBP15.13■□□□□ 0.01
SDC2-202ENST00000518385 RAB9BQ9NP90 201 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 RNF7Q9UBF6 113 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 TRAPPC1Q9Y5R8 145 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 ARL2-SNX15V9GYD0 113 aa15.13■□□□□ 0.01
SDC2-202ENST00000518385 IGSF10Q6WRI0 2623 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 TRBV9A0A0B4J1U6 114 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 ODAMA1E959 279 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 DPRXA6NFQ7 191 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 C12orf77C9JDV5 145 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 PAGE4O60829 102 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 GABRA2P47869 451 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 SELENOTP62341 195 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 HTD2P86397 168 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 TNFAIP6P98066 277 aaPredicted RBP15.12■□□□□ 0.01
SDC2-202ENST00000518385 CDSNQ15517 529 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 IZUMO4Q1ZYL8 232 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 CR1LQ2VPA4 569 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 H2BFWTQ7Z2G1 175 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 MOGAT3Q86VF5 341 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 CD177Q8N6Q3 437 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 OR52E5Q8NH55 327 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 ITLN1Q8WWA0 313 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 TMEM37Q8WXS4 190 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 NINJ1Q92982 152 aa15.12■□□□□ 0.01
SDC2-202ENST00000518385 MDFIC2A0A1B0GVS7 189 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 SPINT2O43291 252 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 IGHV1-46P01743 117 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 HBZP02008 142 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 IL3RAP26951 378 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 OPRK1P41145 380 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 NECAP1Q8NC96 275 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 IGKV1D-17A0A075B6S4 117 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 KRASP01116 189 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 EGR1P18146 543 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 TNFRSF1AP19438 455 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 PDLIM3Q53GG5 364 aaPredicted RBP15.11■□□□□ 0.01
SDC2-202ENST00000518385 PRR18Q8N4B5 295 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 NAGKQ9UJ70 344 aa15.11■□□□□ 0.01
SDC2-202ENST00000518385 TRAV39A0A0B4J263 110 aa15.1■□□□□ 0.01
SDC2-202ENST00000518385 A0A1W2PPV4 95 aa15.1■□□□□ 0.01
SDC2-202ENST00000518385 MT-CO2P00403 227 aa15.1■□□□□ 0.01
SDC2-202ENST00000518385 TPPP2P59282 170 aa15.1■□□□□ 0.01
SDC2-202ENST00000518385 BSPH1Q075Z2 132 aa15.1■□□□□ 0.01
SDC2-202ENST00000518385 OR1L1Q8NH94 360 aa15.1■□□□□ 0.01
SDC2-202ENST00000518385 C20orf144Q9BQM9 153 aa15.1■□□□□ 0.01
SDC2-202ENST00000518385 GCM1Q9NP62 436 aa15.1■□□□□ 0.01
SDC2-202ENST00000518385 A0A0U1RQK1 487 aa15.09■□□□□ 0.01
SDC2-202ENST00000518385 ZNF320A2RRD8 509 aa15.09■□□□□ 0.01
SDC2-202ENST00000518385 CXorf1O96002 111 aa15.09■□□□□ 0.01
SDC2-202ENST00000518385 IRF2P14316 349 aa15.09■□□□□ 0.01
SDC2-202ENST00000518385 FAM78BQ5VT40 261 aa15.09■□□□□ 0.01
SDC2-202ENST00000518385 TGIF2LXQ8IUE1 241 aa15.09■□□□□ 0.01
SDC2-202ENST00000518385 SDSLQ96GA7 329 aa15.09■□□□□ 0.01
SDC2-202ENST00000518385 ELOVL1Q9BW60 279 aa15.09■□□□□ 0.01
SDC2-202ENST00000518385 FAM234AQ9H0X4 552 aa15.09■□□□□ 0.01
SDC2-202ENST00000518385 METRNQ9UJH8 293 aa15.09■□□□□ 0.01
SDC2-202ENST00000518385 DIDO1Q9BTC0 2240 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms