RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 BTCP35070 178 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HOXA1P49639 335 aaPredicted RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 COMPP49747 757 aaPredicted RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR2B8PP59922 312 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 RPP30P78346 268 aaKnown RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 IFITM3Q01628 133 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 DHRS2Q13268 280 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TMEM187Q14656 261 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SMCO1Q147U7 214 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 POU2AF1Q16633 256 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ZNF585BQ52M93 769 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CXorf66Q5JRM2 361 aaPredicted RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TEX38Q6PEX7 206 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 GSG1LQ6UXU4 331 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NOXA1Q86UR1 476 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PRIMA1Q86XR5 153 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PUSL1Q8N0Z8 303 aaKnown RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 STPG2Q8N412 459 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 KLHDC1Q8N7A1 406 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 MINDY2Q8NBR6 621 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 DUSP18Q8NEJ0 188 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 LFNGQ8NES3 379 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR5AU1Q8NGC0 362 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR5B3Q8NH48 314 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 LINC01006Q8NI28 216 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 GLYATL2Q8WU03 294 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SRSF12Q8WXF0 261 aaKnown RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 LSM10Q969L4 123 aaKnown RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TMEM230Q96A57 120 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SEC22AQ96IW7 307 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SEC22CQ9BRL7 303 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 QTRT1Q9BXR0 403 aaKnown RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HIPK2Q9H2X6 1198 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ZNF702PQ9H963 129 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PLEKHA3Q9HB20 300 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HEYLQ9NQ87 328 aaPredicted RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 COA4Q9NYJ1 87 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 THYN1Q9P016 225 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 GSKIPQ9P0R6 139 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CACNG5Q9UF02 275 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 LINC00527Q9UJ94 153 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 FOXA2Q9Y261 457 aaPredicted RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NSG2Q9Y328 171 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 WSB1Q9Y6I7 421 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TMEM56-RWDD3S4R434 201 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 AKAP9Q99996 3911 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 FN1P02751 2386 aaKnown RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NF1P21359 2839 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 A0A0G2JLM5 398 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TEX50A0A1B0GTY4 177 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 A0A1B0GU03 582 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 C15orf61A6NNL5 157 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SNRPGP15A8MWD9 76 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 L7N2F9 121 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 FBXO24O75426 580 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SCGB2A1O75556 95 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 LY86O95711 162 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SCGB1D2O95969 90 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 RLN2P04090 185 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 IGF1P05019 195 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CRYGBP07316 175 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 APELAP0DMC3 54 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR13C7P0DN81 318 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HIST1H1BP16401 226 aaKnown RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PVALBP20472 110 aaPredicted RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SPCS3P61009 180 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HSPE1P61604 102 aaKnown RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 VAMP2P63027 116 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SUPT4H1P63272 117 aaKnown RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CYCSP99999 105 aaKnown RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PJVKQ0ZLH3 352 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 KRTAP24-1Q3LI83 254 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 AKIRIN2Q53H80 203 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 AWAT1Q58HT5 328 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 GGNBP1Q5YKI7 109 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 LYZL2Q7Z4W2 148 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CADM3Q8N126 398 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 Q8N2B8 174 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 LRTM2Q8N967 370 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR5T1Q8NG75 326 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR5M8Q8NGP6 311 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR1L6Q8NGR2 347 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SGMS2Q8NHU3 365 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 MITD1Q8WV92 249 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 GPR146Q96CH1 333 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 RBMXL1Q96E39 390 aaKnown RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NOL4LQ96MY1 436 aaPredicted RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HSPB9Q9BQS6 159 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SRSF8Q9BRL6 282 aaKnown RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 MARVELD1Q9BSK0 173 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 FAM103A1Q9BTL3 118 aaKnown RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 MED28Q9H204 178 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TPSG1Q9NRR2 321 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ZFP57Q9NU63 452 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PRR13Q9NZ81 148 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PAIP2BQ9ULR5 123 aaKnown RBP4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ZNF257Q9Y2Q1 563 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 VPS13CQ709C8 3753 aa4.31□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TRAV3A0A0B4J244 114 aa4.3□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HMX3A6NHT5 357 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms