RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	MLLT11	Q13015	90 aa	Predicted RBP	11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	ARL6IP1	Q15041	203 aa		11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	ODF3L2	Q3SX64	289 aa		11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	ZNF502	Q8TBZ5	544 aa		11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	GALNT14	Q96FL9	552 aa		11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	MAP6D1	Q9H9H5	199 aa		11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	ACOT13	Q9NPJ3	140 aa		11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	THYN1	Q9P016	225 aa		11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	ELF5	Q9UKW6	265 aa	Predicted RBP	11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	IGKV1D-13	A0A0B4J2D9	117 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	OR4C46	A6NHA9	309 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	CGB1	A6NKQ9	187 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	IFITM5	A6NNB3	132 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	PDCD5	O14737	125 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	IGKV1-13	P0DP09	117 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	PTBP1	P26599	531 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	ZNF66	Q6ZN08	573 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	MFSD4A	Q8N468	514 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	OR4A5	Q8NH83	315 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	GATAD1	Q8WUU5	269 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	TMEM190	Q8WZ59	177 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	DAZ1	Q9NQZ3	744 aa	Known RBP	11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	BET1L	Q9NYM9	111 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	TAS2R8	Q9NYW2	309 aa		11.63	□□□□□ -0.55
LMNA-223	ENST00000515459	TGOLN2	O43493	480 aa		11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	FCGR2B	P31994	310 aa	Predicted RBP	11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	OR10A3	P58181	314 aa		11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	RCN1	Q15293	331 aa		11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	TIMM50	Q3ZCQ8	353 aa		11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	AIFM2	Q9BRQ8	373 aa		11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	MFF	Q9GZY8	342 aa		11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	ATG5	Q9H1Y0	275 aa		11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	DCSTAMP	Q9H295	470 aa		11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	HRASLS	Q9HDD0	168 aa		11.62	□□□□□ -0.55
LMNA-223	ENST00000515459	HECTD4	Q9Y4D8	3996 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	S1PR2	O95136	353 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	IFNA4	P05014	189 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	RPA2	P15927	270 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	OR2B8P	P59922	312 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	RBMS2	Q15434	407 aa	Known RBP	11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	CDNF	Q49AH0	187 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	CNIH2	Q6PI25	160 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	OR5B3	Q8NH48	314 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	C11orf45	Q8TAV5	145 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	MGLL	Q99685	303 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	TPRKB	Q9Y3C4	175 aa		11.61	□□□□□ -0.55
LMNA-223	ENST00000515459	DNAH10	Q8IVF4	4471 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	TRAV1-2	A0A0B4J238	106 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	IGLC7	A0M8Q6	106 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	CYB5B	O43169	146 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	NANOS2	P60321	138 aa	Known RBP	11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	PRR20E	P86478	221 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	PRR20C	P86479	221 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	PRR20D	P86480	221 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	PRR20B	P86481	221 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	PRR20A	P86496	221 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	HACD4	Q5VWC8	232 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	VN1R17P	Q8TDU5	208 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	GPHA2	Q96T91	129 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	RARRES2	Q99969	163 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	SRSF8	Q9BRL6	282 aa	Known RBP	11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	COMMD5	Q9GZQ3	224 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	VCX	Q9H320	206 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	DUSP21	Q9H596	190 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	FBXL17	Q9UF56	701 aa		11.6	□□□□□ -0.55
LMNA-223	ENST00000515459	OR2T8	A6NH00	312 aa		11.59	□□□□□ -0.55
LMNA-223	ENST00000515459	CASQ2	O14958	399 aa	Predicted RBP	11.59	□□□□□ -0.55
LMNA-223	ENST00000515459	RGS10	O43665	173 aa		11.59	□□□□□ -0.55
LMNA-223	ENST00000515459	TCTA	P57738	103 aa		11.59	□□□□□ -0.55
LMNA-223	ENST00000515459	APRG1	Q8IVJ8	170 aa		11.59	□□□□□ -0.55
LMNA-223	ENST00000515459	CD300LF	Q8TDQ1	290 aa		11.59	□□□□□ -0.55
LMNA-223	ENST00000515459	BSCL2	Q96G97	398 aa	Predicted RBP	11.59	□□□□□ -0.55
LMNA-223	ENST00000515459	C20orf24	Q9BUV8	137 aa		11.59	□□□□□ -0.55
LMNA-223	ENST00000515459	CSTL1	Q9H114	145 aa		11.59	□□□□□ -0.55
LMNA-223	ENST00000515459	ANXA10	Q9UJ72	324 aa		11.59	□□□□□ -0.55
LMNA-223	ENST00000515459	MPTX1	A8MV57	137 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	NDUFA4	O00483	81 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	EBAG9	O00559	213 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	TNFSF12	O43508	249 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	CTSD	P07339	412 aa	Predicted RBP	11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	RAB3B	P20337	219 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	MYL9	P24844	172 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	SPSB3	Q6PJ21	355 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	SPAG16	Q8N0X2	631 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	C2CD4C	Q8TF44	421 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	NUDCD2	Q8WVJ2	157 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	CCDC90B	Q9GZT6	254 aa		11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	C11orf68	Q9H3H3	251 aa	Known RBP	11.58	□□□□□ -0.56
LMNA-223	ENST00000515459	TRAV3	A0A0B4J244	114 aa		11.57	□□□□□ -0.56
LMNA-223	ENST00000515459		K7EMT4	169 aa		11.57	□□□□□ -0.56
LMNA-223	ENST00000515459	UPK2	O00526	184 aa		11.57	□□□□□ -0.56
LMNA-223	ENST00000515459	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.57	□□□□□ -0.56
LMNA-223	ENST00000515459	CMC4	P56277	68 aa	Predicted RBP	11.57	□□□□□ -0.56
LMNA-223	ENST00000515459	TAS2R31	P59538	309 aa		11.57	□□□□□ -0.56
LMNA-223	ENST00000515459	MSMO1	Q15800	293 aa		11.57	□□□□□ -0.56
LMNA-223	ENST00000515459	GDPD1	Q8N9F7	314 aa		11.57	□□□□□ -0.56
LMNA-223	ENST00000515459	OR10W1	Q8NGF6	305 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms