RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 VSTM2AQ8TAG5 236 aa14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 TMEM190Q8WZ59 177 aa14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 C11orf68Q9H3H3 251 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 RBMX2Q9Y388 322 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 ZNF207O43670 478 aaKnown RBP14.88□□□□□ -0.03
SQSTM1-215ENST00000514093 IGLV2-14P01704 120 aa14.88□□□□□ -0.03
SQSTM1-215ENST00000514093 CTSDP07339 412 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-215ENST00000514093 BRWD1-AS2P59051 145 aa14.88□□□□□ -0.03
SQSTM1-215ENST00000514093 SPATA2Q9UM82 520 aa14.88□□□□□ -0.03
SQSTM1-215ENST00000514093 TGOLN2O43493 480 aa14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 GNAO1P09471 354 aa14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 NFYAP23511 347 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 RPL8P62917 257 aaKnown RBP14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 HES5Q5TA89 166 aa14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 TMEM91Q6ZNR0 172 aa14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 OR4S2Q8NH73 311 aa14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 TCTEX1D2Q8WW35 142 aa14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 GPHA2Q96T91 129 aa14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 C20orf24Q9BUV8 137 aa14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 C6orf62Q9GZU0 229 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 DAZ1Q9NQZ3 744 aaKnown RBP14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 ELF5Q9UKW6 265 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 RAB22AQ9UL26 194 aa14.87□□□□□ -0.03
SQSTM1-215ENST00000514093 PKD1P98161 4303 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 OR2T8A6NH00 312 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 MFNGO00587 321 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 CD36P16671 472 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 TFPI2P48307 235 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 LIPKQ5VXJ0 399 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 C10orf67Q8IYJ2 551 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 DHRSXQ8N5I4 330 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 OR10R2Q8NGX6 335 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 OR4A5Q8NH83 315 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 MND1Q9BWT6 205 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 PLCXD1Q9NUJ7 323 aa14.86□□□□□ -0.03
SQSTM1-215ENST00000514093 IGKV1D-13A0A0B4J2D9 117 aa14.85□□□□□ -0.03
SQSTM1-215ENST00000514093 IGKV1-13P0DP09 117 aa14.85□□□□□ -0.03
SQSTM1-215ENST00000514093 HLA-GP17693 338 aa14.85□□□□□ -0.03
SQSTM1-215ENST00000514093 PTBP1P26599 531 aaKnown RBP eCLIP14.85□□□□□ -0.03
SQSTM1-215ENST00000514093 TALDO1P37837 337 aa14.85□□□□□ -0.03
SQSTM1-215ENST00000514093 SPHARQ15513 63 aa14.85□□□□□ -0.03
SQSTM1-215ENST00000514093 FKBP14Q9NWM8 211 aa14.85□□□□□ -0.03
SQSTM1-215ENST00000514093 LSM2Q9Y333 95 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-215ENST00000514093 OR2W1Q9Y3N9 320 aa14.85□□□□□ -0.03
SQSTM1-215ENST00000514093 IGHV3-21A0A0B4J1V1 117 aa14.84□□□□□ -0.03
SQSTM1-215ENST00000514093 PRSS29PA6NIE9 313 aa14.84□□□□□ -0.03
SQSTM1-215ENST00000514093 HLA-DQB1P01920 261 aa14.84□□□□□ -0.03
SQSTM1-215ENST00000514093 HIST1H1DP16402 221 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-215ENST00000514093 OR2B8PP59922 312 aa14.84□□□□□ -0.03
SQSTM1-215ENST00000514093 TAS2R8Q9NYW2 309 aa14.84□□□□□ -0.03
SQSTM1-215ENST00000514093 IGKV3-7A0A075B6H7 116 aa14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 GADD45AP24522 165 aa14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 CALRP27797 417 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 RPS25P62851 125 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 EIF4EBP1Q13541 118 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 C8orf59Q8N0T1 100 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 MFSD4AQ8N468 514 aa14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 HSD17B10Q99714 261 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 CHRDL1Q9BU40 450 aa14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 HRASLSQ9HDD0 168 aa14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 V9GY05 133 aa14.83□□□□□ -0.04
SQSTM1-215ENST00000514093 TRAV3A0A0B4J244 114 aa14.82□□□□□ -0.04
SQSTM1-215ENST00000514093 IGLC7A0M8Q6 106 aa14.82□□□□□ -0.04
SQSTM1-215ENST00000514093 HRASP01112 189 aa14.82□□□□□ -0.04
SQSTM1-215ENST00000514093 Q6ZS49 121 aa14.82□□□□□ -0.04
SQSTM1-215ENST00000514093 UFD1Q92890 307 aa14.82□□□□□ -0.04
SQSTM1-215ENST00000514093 RNF2Q99496 336 aa14.82□□□□□ -0.04
SQSTM1-215ENST00000514093 THYN1Q9P016 225 aa14.82□□□□□ -0.04
SQSTM1-215ENST00000514093 PTGES3LE9PB15 166 aa14.81□□□□□ -0.04
SQSTM1-215ENST00000514093 RTL8CO15255 209 aa14.81□□□□□ -0.04
SQSTM1-215ENST00000514093 CA1P00915 261 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-215ENST00000514093 ADMP35318 185 aa14.81□□□□□ -0.04
SQSTM1-215ENST00000514093 TIMM50Q3ZCQ8 353 aa14.81□□□□□ -0.04
SQSTM1-215ENST00000514093 OR10W1Q8NGF6 305 aa14.81□□□□□ -0.04
SQSTM1-215ENST00000514093 VN1R17PQ8TDU5 208 aa14.81□□□□□ -0.04
SQSTM1-215ENST00000514093 CENPOQ9BU64 300 aa14.81□□□□□ -0.04
SQSTM1-215ENST00000514093 IGHV3-49A0A0A0MS15 119 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 C11orf94C9JXX5 98 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 M0R2N4 97 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 NDUFA4O00483 81 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 TNFSF12O43508 249 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 ARL6IP5O75915 188 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 SLC22A5O76082 557 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 IRF3Q14653 427 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 TMEM187Q14656 261 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 SLC25A24Q6NUK1 477 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 GBGT1Q8N5D6 347 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 BET1LQ9NYM9 111 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 SMPXQ9UHP9 88 aa14.8□□□□□ -0.04
SQSTM1-215ENST00000514093 IGHV4-4A0A075B6R2 117 aa14.79□□□□□ -0.04
SQSTM1-215ENST00000514093 K7EMT4 169 aa14.79□□□□□ -0.04
SQSTM1-215ENST00000514093 HSMCR30P0CW71 290 aa14.79□□□□□ -0.04
SQSTM1-215ENST00000514093 UBAC2Q8NBM4 344 aa14.79□□□□□ -0.04
SQSTM1-215ENST00000514093 BSCL2Q96G97 398 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-215ENST00000514093 ETV7Q9Y603 341 aa14.79□□□□□ -0.04
SQSTM1-215ENST00000514093 HLA-DMBP28068 263 aa14.78□□□□□ -0.04
SQSTM1-215ENST00000514093 OR10A3P58181 314 aa14.78□□□□□ -0.04
SQSTM1-215ENST00000514093 Q6ZTC4 211 aa14.78□□□□□ -0.04
SQSTM1-215ENST00000514093 RHPN1-AS1Q9BWJ2 59 aa14.78□□□□□ -0.04
SQSTM1-215ENST00000514093 IGHV3OR16-13A0A075B7E8 117 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms