RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 CHRNA7P36544 502 aa14.75□□□□□ -0.05
CCHCR1-228ENST00000509552 TMEM30BQ3MIR4 351 aa14.75□□□□□ -0.05
CCHCR1-228ENST00000509552 SSMEM1Q8WWF3 244 aa14.75□□□□□ -0.05
CCHCR1-228ENST00000509552 CCL13Q99616 98 aa14.75□□□□□ -0.05
CCHCR1-228ENST00000509552 TM4SF5O14894 197 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 IL6RP08887 468 aaPredicted RBP14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 GNG10P50151 68 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 DNLZQ5SXM8 178 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 ZNF439Q8NDP4 499 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 BTF3L4Q96K17 158 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 HIST1H2BLQ99880 126 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 ZFHX4Q86UP3 3567 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 CD40P25942 277 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 CEACAM8P31997 349 aaPredicted RBP14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 FAM27E3Q08E93 113 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 ARSJQ5FYB0 599 aaPredicted RBP14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 CISD2Q8N5K1 135 aaKnown RBP14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 OR1P1Q8NH06 330 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 HINT2Q9BX68 163 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 PRNDQ9UKY0 176 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 OR51B2Q9Y5P1 312 aa14.74□□□□□ -0.05
CCHCR1-228ENST00000509552 CA2P00918 260 aa14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 TYMSP04818 313 aa14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 HIST1H1BP16401 226 aaKnown RBP14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 RHOBP62745 196 aa14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 LCN2P80188 198 aa14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 POU2AF1Q16633 256 aa14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 TET2Q6N021 2002 aaPredicted RBP14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 ZNF788Q6ZQV5 615 aa14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 CORO2AQ92828 525 aa14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 ACY3Q96HD9 319 aa14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 DERL1Q9BUN8 251 aa14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 DSCAMO60469 2012 aa14.73□□□□□ -0.05
CCHCR1-228ENST00000509552 XKRY2A2RUG3 117 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 A8MXE2 369 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 MT-CO2P00403 227 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 RD3LP0DJH9 198 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 CDPF1Q6NVV7 123 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 TCF23Q7RTU1 214 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 FAM216BQ8N7L0 139 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 RPL29P47914 159 aaKnown RBP14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 RTL8BQ17RB0 113 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 KRTCAP3Q53RY4 240 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 ACTL10Q5JWF8 245 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 STPG3Q8N7X2 389 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 FAM57AQ8TBR7 257 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 C1orf159Q96HA4 380 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 LINC00574Q9H8X3 128 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 TP53TG5Q9Y2B4 290 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 ASPMQ8IZT6 3477 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 CNOT1A5YKK6 2376 aaKnown RBP14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 TTC28Q96AY4 2481 aa14.72□□□□□ -0.05
CCHCR1-228ENST00000509552 EFNB3Q15768 340 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 FAM209BQ5JX69 171 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 FAM78BQ5VT40 261 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 RBMXL3Q8N7X1 1067 aaKnown RBP14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 IMMP2LQ96T52 175 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 PLEKHA3Q9HB20 300 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 AURKAIP1Q9NWT8 199 aaPredicted RBP14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 RPUSD1Q9UJJ7 312 aaKnown RBP14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 FUT9Q9Y231 359 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 TRBV23-1A0A0A0MS06 115 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 MDFIC2A0A1B0GVS7 189 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 hADV38S2A0JD32 116 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 FNDC10F2Z333 226 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 J3QR06 171 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 COA6Q5JTJ3 125 aaKnown RBP14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 NUP37Q8NFH4 326 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 ZCCHC14Q8WYQ9 949 aaKnown RBP14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 TMEM204Q9BSN7 226 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 ZNF257Q9Y2Q1 563 aa14.71□□□□□ -0.05
CCHCR1-228ENST00000509552 GCHFRP30047 84 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 TEX36Q5VZQ5 186 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 TMEM108Q6UXF1 575 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 SLC25A48Q6ZT89 311 aaKnown RBP14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 TMEM37Q8WXS4 190 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 SFRP2Q96HF1 295 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 SLC35D1Q9NTN3 355 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 DSCAML1Q8TD84 2053 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 NBEAQ8NFP9 2946 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 NKX6-3A6NJ46 265 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 C1QTNF9P0C862 333 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 C22orf34Q6ZV56 151 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 SEPSECSQ9HD40 501 aaKnown RBP14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 TANC2Q9HCD6 1990 aa14.7□□□□□ -0.06
CCHCR1-228ENST00000509552 SCO2A0A1W2PP80 73 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 UPK2O00526 184 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 MMP23AO75900 390 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 NDUFB7P17568 137 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 TNFRSF1AP19438 455 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 PRCDQ00LT1 54 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 NEUROG1Q92886 237 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 PRDM13Q9H4Q3 707 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 CFAP47Q6ZTR5 3102 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 CT45A6P0DMU7 189 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 CT45A5P0DMU8 189 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 CT45A7P0DMV0 189 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 MYOD1P15172 320 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 IGFBP2P18065 325 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 IL3RAP26951 378 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms