RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 DIRAS2Q96HU8 199 aa12.39□□□□□ -0.43
PDLIM5-212ENST00000509333 SLIRPQ9GZT3 109 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-212ENST00000509333 NXF2Q9GZY0 626 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-212ENST00000509333 HRASLSQ9HDD0 168 aa12.39□□□□□ -0.43
PDLIM5-212ENST00000509333 CCDC59Q9P031 241 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-212ENST00000509333 PEF1Q9UBV8 284 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-212ENST00000509333 ZNF257Q9Y2Q1 563 aa12.39□□□□□ -0.43
PDLIM5-212ENST00000509333 NPIPB5A8MRT5 1133 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 CD74P04233 296 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 IFNA6P05013 189 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 RPA2P15927 270 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 PSMB6P28072 239 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 ECI1P42126 302 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 OR2B8PP59922 312 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 DEFA5Q01523 94 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 ATP5G2Q06055 141 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 ACSM6Q6P461 480 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 NECAP1Q8NC96 275 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 FANCD2OSQ96PS1 177 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 FAM212BQ9NTI7 297 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 TMEM140Q9NV12 185 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 COMMD9Q9P000 198 aa12.38□□□□□ -0.43
PDLIM5-212ENST00000509333 DNAH9Q9NYC9 4486 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 TEX50A0A1B0GTY4 177 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 KRASP01116 189 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 FGF2P09038 288 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 AREGP15514 252 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 CTRB1P17538 263 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 TBPP20226 339 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 ZP3P21754 424 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 TNFSF8P32971 234 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 SSBP1Q04837 148 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 RNASE10Q5GAN6 216 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 CTRB2Q6GPI1 263 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 SLC38A6Q8IZM9 456 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 DMBX1Q8NFW5 382 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 OR4D10Q8NGI6 311 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 TERB2Q8NHR7 220 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 DMRT1Q9Y5R6 373 aa12.37□□□□□ -0.43
PDLIM5-212ENST00000509333 FAM223BA6NKX1 122 aa12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 CTDSPLO15194 276 aa12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 OR2J3O76001 311 aa12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 TAS2R19P59542 299 aa12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 MRPS10P82664 201 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 IL34Q6ZMJ4 242 aa12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 C19orf35Q6ZS72 473 aa12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 FAM223AQ8IWN6 122 aa12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 ARRDC1Q8N5I2 433 aa12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 COMMD5Q9GZQ3 224 aa12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 RABL2BQ9UNT1 228 aa12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 LSM4Q9Y4Z0 139 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-212ENST00000509333 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 DPPA5A6NC42 116 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 MARCH11A6NNE9 402 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 NDUFB8O95169 186 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 RAB3DO95716 219 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 IGKV1-39P01597 117 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 IGKV1D-39P04432 117 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 PTBP1P26599 531 aaKnown RBP eCLIP12.35□□□□□ -0.439e-7■■■■■ 30.4
PDLIM5-212ENST00000509333 S100GP29377 79 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 G6PCP35575 357 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 RND3P61587 244 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 STEAP1BQ6NZ63 245 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 FBXL7Q9UJT9 491 aa12.35□□□□□ -0.43
PDLIM5-212ENST00000509333 IGLC7A0M8Q6 106 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 SAP30O75446 220 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 ERVK-16P61578 105 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 C15orf32Q32M92 178 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 OR10W1Q8NGF6 305 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 SMIM4Q8WVI0 70 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 MRGPRFQ96AM1 343 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 ZNF486Q96H40 463 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 SEC22AQ96IW7 307 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 OR4C12Q96R67 309 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 PRR25Q96S07 402 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 SRSF8Q9BRL6 282 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 C6orf62Q9GZU0 229 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 NDUFA4L2Q9NRX3 87 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 NSG2Q9Y328 171 aa12.34□□□□□ -0.43
PDLIM5-212ENST00000509333 GSTZ1O43708 216 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 NOL3O60936 208 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 REG1AP05451 166 aa12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 TRAPPC2P0DI81 140 aa12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 TRAPPC2BP0DI82 140 aa12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 PI3P19957 117 aa12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 IL18Q14116 193 aa12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 OR1L8Q8NGR8 309 aa12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 MCFD2Q8NI22 146 aa12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 ELOVL1Q9BW60 279 aa12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 QTRT1Q9BXR0 403 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 ZNF256Q9Y2P7 627 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-212ENST00000509333 IGLV11-55A0A075B6I3 123 aa12.32□□□□□ -0.44
PDLIM5-212ENST00000509333 FABP12A6NFH5 140 aa12.32□□□□□ -0.44
PDLIM5-212ENST00000509333 DBX1A6NMT0 343 aa12.32□□□□□ -0.44
PDLIM5-212ENST00000509333 BMPR1BO00238 502 aa12.32□□□□□ -0.44
PDLIM5-212ENST00000509333 SNAPC5O75971 98 aa12.32□□□□□ -0.44
PDLIM5-212ENST00000509333 DHFRP00374 187 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms