RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 THOC7Q6I9Y2 204 aaKnown RBP11.7□□□□□ -0.54
RNF4-210ENST00000508235 H2BFWTQ7Z2G1 175 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 SGPP2Q8IWX5 399 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 OR5T1Q8NG75 326 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 FYTTD1Q96QD9 318 aaKnown RBP11.7□□□□□ -0.54
RNF4-210ENST00000508235 TP53RKQ96S44 253 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 KLK15Q9H2R5 256 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 FKBP11Q9NYL4 201 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 VSIG4Q9Y279 399 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 KCNIP3Q9Y2W7 256 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 PIGBOS1A0A0B4J2F0 54 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 A0A0G2JLM5 398 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 CRYM-AS1A6NIL9 109 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 DHFRP00374 187 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 TRGV3P03979 118 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 IL7P13232 177 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 UCP1P25874 307 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 MYCNOSP40205 109 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 TPPP2P59282 170 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 DHODHQ02127 395 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 C10orf55Q5SWW7 151 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 ASPHD1Q5U4P2 390 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 LCNL1Q6ZST4 164 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 C8orf86Q6ZUL3 223 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 TTC9CQ8N5M4 171 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 ZNF491Q8N8L2 437 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 SEC22AQ96IW7 307 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 SDHCQ99643 169 aaPredicted RBP11.69□□□□□ -0.54
RNF4-210ENST00000508235 C7orf50Q9BRJ6 194 aaKnown RBP11.69□□□□□ -0.54
RNF4-210ENST00000508235 SRSF8Q9BRL6 282 aaKnown RBP11.69□□□□□ -0.54
RNF4-210ENST00000508235 CCDC32Q9BV29 185 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 NAA60Q9H7X0 242 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 AKIP1Q9NQ31 210 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 COA4Q9NYJ1 87 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 PRNDQ9UKY0 176 aa11.69□□□□□ -0.54
RNF4-210ENST00000508235 OR5AC1P0C628 307 aa11.68□□□□□ -0.54
RNF4-210ENST00000508235 AKR1C2P52895 323 aa11.68□□□□□ -0.54
RNF4-210ENST00000508235 OR2B8PP59922 312 aa11.68□□□□□ -0.54
RNF4-210ENST00000508235 RBMS2Q15434 407 aaKnown RBP11.68□□□□□ -0.54
RNF4-210ENST00000508235 HSD17B13Q7Z5P4 300 aaPredicted RBP11.68□□□□□ -0.54
RNF4-210ENST00000508235 ADAD2Q8NCV1 583 aaKnown RBP11.68□□□□□ -0.54
RNF4-210ENST00000508235 OR5B3Q8NH48 314 aa11.68□□□□□ -0.54
RNF4-210ENST00000508235 MS4A10Q96PG2 267 aa11.68□□□□□ -0.54
RNF4-210ENST00000508235 TMEM222Q9H0R3 208 aa11.68□□□□□ -0.54
RNF4-210ENST00000508235 ZNF257Q9Y2Q1 563 aa11.68□□□□□ -0.54
RNF4-210ENST00000508235 TRAV3A0A0B4J244 114 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 C13orf42A0A1B0GVH6 325 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 NPIPB5A8MRT5 1133 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 TEX22C9J3V5 150 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 IGKV1-39P01597 117 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 IGKV1D-39P04432 117 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 APELAP0DMC3 54 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 ANXA3P12429 323 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 AKR1C4P17516 323 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 RUNX1Q01196 453 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 KIAA0141Q14154 515 aaPredicted RBP11.67□□□□□ -0.54
RNF4-210ENST00000508235 SP6Q3SY56 376 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 MRPL41Q8IXM3 137 aaKnown RBP11.67□□□□□ -0.54
RNF4-210ENST00000508235 OR1L8Q8NGR8 309 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 OR4A16Q8NH70 328 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 RNASE11Q8TAA1 199 aaKnown RBP11.67□□□□□ -0.54
RNF4-210ENST00000508235 RRNAD1Q96FB5 475 aaKnown RBP11.67□□□□□ -0.54
RNF4-210ENST00000508235 GALNT14Q96FL9 552 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 USMG5Q96IX5 58 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 QTRT1Q9BXR0 403 aaKnown RBP11.67□□□□□ -0.54
RNF4-210ENST00000508235 WDR12Q9GZL7 423 aaKnown RBP11.67□□□□□ -0.54
RNF4-210ENST00000508235 DNHD1Q96M86 4753 aa11.67□□□□□ -0.54
RNF4-210ENST00000508235 HMX3A6NHT5 357 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 FAM223BA6NKX1 122 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 C15orf61A6NNL5 157 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 CCL24O00175 119 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 CDS2O95674 445 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 TRAPPC2P0DI81 140 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 TRAPPC2BP0DI82 140 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 CD33P20138 364 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 SRPXP78539 464 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 TMEM128Q5BJH2 165 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 C18orf65Q6ZTR6 163 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 TMED4Q7Z7H5 227 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 FAM219AQ8IW50 185 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 FAM223AQ8IWN6 122 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 CASTOR1Q8WTX7 329 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 GLYATL2Q8WU03 294 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 RBPMSQ93062 196 aaKnown RBP11.66□□□□□ -0.54
RNF4-210ENST00000508235 TMEM56Q96MV1 263 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 TMEM14BQ9NUH8 114 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 OR51B2Q9Y5P1 312 aa11.66□□□□□ -0.54
RNF4-210ENST00000508235 TEX50A0A1B0GTY4 177 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 E7EUB6 86 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 I3L521 148 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 CYB5BO43169 146 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 RBMXL2O75526 392 aaKnown RBP11.65□□□□□ -0.54
RNF4-210ENST00000508235 CRYGCP07315 174 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 LGALS1P09382 135 aaKnown RBP11.65□□□□□ -0.54
RNF4-210ENST00000508235 HIST1H1BP16401 226 aaKnown RBP11.65□□□□□ -0.54
RNF4-210ENST00000508235 PSMB6P28072 239 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 ZNF846Q147U1 533 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 IL22RA2Q969J5 263 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 LSM10Q969L4 123 aaKnown RBP11.65□□□□□ -0.54
RNF4-210ENST00000508235 TMEM230Q96A57 120 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms