RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 LY96Q9Y6Y9 160 aa20.23■□□□□ 0.83
DDX41-202ENST00000503078 TET2Q6N021 2002 aaPredicted RBP20.23■□□□□ 0.83
DDX41-202ENST00000503078 ARSJQ5FYB0 599 aaPredicted RBP20.23■□□□□ 0.83
DDX41-202ENST00000503078 TEPPQ6URK8 271 aa20.23■□□□□ 0.83
DDX41-202ENST00000503078 TOMM20LQ6UXN7 152 aa20.23■□□□□ 0.83
DDX41-202ENST00000503078 STPG3Q8N7X2 389 aa20.23■□□□□ 0.83
DDX41-202ENST00000503078 TRGV10A0A0A0MS01 117 aa20.22■□□□□ 0.83
DDX41-202ENST00000503078 A8MXE2 369 aa20.22■□□□□ 0.83
DDX41-202ENST00000503078 CD33P20138 364 aa20.22■□□□□ 0.83
DDX41-202ENST00000503078 UHRF2Q96PU4 802 aa20.22■□□□□ 0.83
DDX41-202ENST00000503078 SERF1AO75920 110 aa20.22■□□□□ 0.83
DDX41-202ENST00000503078 RPL29P47914 159 aaKnown RBP20.22■□□□□ 0.83
DDX41-202ENST00000503078 LGALS4P56470 323 aa20.22■□□□□ 0.83
DDX41-202ENST00000503078 RANP62826 216 aaKnown RBP20.22■□□□□ 0.83
DDX41-202ENST00000503078 OR1L6Q8NGR2 347 aa20.22■□□□□ 0.83
DDX41-202ENST00000503078 OPN3Q9H1Y3 402 aaPredicted RBP20.22■□□□□ 0.83
DDX41-202ENST00000503078 TUBG2Q9NRH3 451 aa20.22■□□□□ 0.83
DDX41-202ENST00000503078 NCOR1O75376 2440 aa20.21■□□□□ 0.83
DDX41-202ENST00000503078 KIR2DS2P43631 304 aa20.21■□□□□ 0.83
DDX41-202ENST00000503078 ZNF134P52741 427 aa20.21■□□□□ 0.83
DDX41-202ENST00000503078 TPTE2P1Q5T6R2 138 aa20.21■□□□□ 0.83
DDX41-202ENST00000503078 TEX43Q6ZNM6 134 aa20.21■□□□□ 0.83
DDX41-202ENST00000503078 EAF1Q96JC9 268 aaPredicted RBP20.21■□□□□ 0.83
DDX41-202ENST00000503078 IFI27L2Q9H2X8 130 aa20.21■□□□□ 0.83
DDX41-202ENST00000503078 FOXH1O75593 365 aa20.21■□□□□ 0.83
DDX41-202ENST00000503078 ZNF705AQ6ZN79 300 aaPredicted RBP20.21■□□□□ 0.83
DDX41-202ENST00000503078 LOXL3P58215 753 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 KRTCAP3Q53RY4 240 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 TMEM178AQ8NBL3 297 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 TRIB1Q96RU8 372 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 C20orf144Q9BQM9 153 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 DUSP13Q9UII6 198 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 IGKV1D-17A0A075B6S4 117 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 C15orf61A6NNL5 157 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 M0QZK8 103 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 FCN1O00602 326 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 TNFSF13O75888 250 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 IGHV3-13P01766 116 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 IGHV3-7P01780 117 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 CECR9P0C854 216 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 G0S2P27469 103 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 RAB31Q13636 194 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 RPEL1Q2QD12 228 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 CR1LQ2VPA4 569 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 PLA2G2CQ5R387 149 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 CNEP1R1Q8N9A8 125 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 HSPB9Q9BQS6 159 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 PARD6AQ9NPB6 346 aa20.2■□□□□ 0.82
DDX41-202ENST00000503078 CD59P13987 128 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 NPY1RP25929 384 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 MRPL52Q86TS9 123 aaKnown RBP20.19■□□□□ 0.82
DDX41-202ENST00000503078 SLC24A4Q8NFF2 622 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 OR4P4Q8NGL7 312 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 DDB2Q92466 427 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 F2RL2O00254 374 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 MGST3O14880 152 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 AREGP15514 252 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 IER3P46695 156 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 BAGE3Q86Y29 109 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 BAGE2Q86Y30 109 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 MMD2Q8IY49 270 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 OR4S2Q8NH73 311 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 LOXL4Q96JB6 756 aa20.19■□□□□ 0.82
DDX41-202ENST00000503078 Q0VG73 95 aa20.18■□□□□ 0.82
DDX41-202ENST00000503078 GUSBP1Q15486 140 aa20.18■□□□□ 0.82
DDX41-202ENST00000503078 ATP1A1-AS1Q5TC04 95 aa20.18■□□□□ 0.82
DDX41-202ENST00000503078 OR5AU1Q8NGC0 362 aa20.18■□□□□ 0.82
DDX41-202ENST00000503078 PPP1R35Q8TAP8 253 aa20.18■□□□□ 0.82
DDX41-202ENST00000503078 MZT1Q08AG7 82 aa20.17■□□□□ 0.82
DDX41-202ENST00000503078 TDRG1Q3Y452 100 aa20.17■□□□□ 0.82
DDX41-202ENST00000503078 MBNL2Q5VZF2 373 aaKnown RBP20.17■□□□□ 0.82
DDX41-202ENST00000503078 V9GYV3 84 aa20.17■□□□□ 0.82
DDX41-202ENST00000503078 TRBV9A0A0B4J1U6 114 aa20.17■□□□□ 0.82
DDX41-202ENST00000503078 SNURFLB1AK76 121 aa20.17■□□□□ 0.82
DDX41-202ENST00000503078 SRRM5B3KS81 715 aa20.17■□□□□ 0.82
DDX41-202ENST00000503078 C1orf162Q8NEQ5 155 aaPredicted RBP20.17■□□□□ 0.82
DDX41-202ENST00000503078 MIEN1Q9BRT3 115 aa20.17■□□□□ 0.82
DDX41-202ENST00000503078 A0A1B0GWJ7 208 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 CDX4O14627 284 aaPredicted RBP20.16■□□□□ 0.82
DDX41-202ENST00000503078 CGAP01215 116 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 COL8A2P25067 703 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 PRR20EP86478 221 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 PRR20CP86479 221 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 PRR20DP86480 221 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 PRR20BP86481 221 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 PRR20AP86496 221 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 TMEM183BQ1AE95 376 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 C1orf229Q6ZS94 237 aaPredicted RBP20.16■□□□□ 0.82
DDX41-202ENST00000503078 FOXA2Q9Y261 457 aaPredicted RBP20.16■□□□□ 0.82
DDX41-202ENST00000503078 CDKN1AP38936 164 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 HSPE1P61604 102 aaKnown RBP20.16■□□□□ 0.82
DDX41-202ENST00000503078 OR2Z1Q8NG97 314 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 ENY2Q9NPA8 101 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 ARL2-SNX15V9GYD0 113 aa20.16■□□□□ 0.82
DDX41-202ENST00000503078 CA2P00918 260 aa20.15■□□□□ 0.82
DDX41-202ENST00000503078 FRMD6-AS1P0C7T7 363 aa20.15■□□□□ 0.82
DDX41-202ENST00000503078 IGFBP2P18065 325 aa20.15■□□□□ 0.82
DDX41-202ENST00000503078 CASP6P55212 293 aa20.15■□□□□ 0.82
DDX41-202ENST00000503078 OR5I1Q13606 314 aa20.15■□□□□ 0.82
DDX41-202ENST00000503078 VWA1Q6PCB0 445 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms