RNA–Protein interactions for RNA: ENST00000495176.5

CYTH3-211, Transcript of cytohesin 3, human

TSL 4

Gene CYTH3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH3-211	ENST00000495176	MRPS26	Q9BYN8	205 aa	Known RBP	13.84	□□□□□ -0.19
CYTH3-211	ENST00000495176	COMMD5	Q9GZQ3	224 aa		13.84	□□□□□ -0.19
CYTH3-211	ENST00000495176	FXYD6	Q9H0Q3	95 aa		13.84	□□□□□ -0.19
CYTH3-211	ENST00000495176	SCPEP1	Q9HB40	452 aa		13.84	□□□□□ -0.19
CYTH3-211	ENST00000495176	TMEM140	Q9NV12	185 aa		13.84	□□□□□ -0.19
CYTH3-211	ENST00000495176	NPIPB5	A8MRT5	1133 aa		13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	PPP5D1	E7EU14	171 aa		13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	UPK2	O00526	184 aa		13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	GABARAP	O95166	117 aa		13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	NDUFB8	O95169	186 aa		13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	HLA-A	P01891	365 aa	Known RBP	13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	ZNF182	P17025	639 aa	Predicted RBP	13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	PSMB6	P28072	239 aa		13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	LPAR6	P43657	344 aa		13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	ERVK-16	P61578	105 aa		13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	HINT2	Q9BX68	163 aa		13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	PLEKHA2	Q9HB19	425 aa		13.83	□□□□□ -0.2
CYTH3-211	ENST00000495176	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176		M0QYG6	137 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	BMPR1B	O00238	502 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	GPR31	O00270	319 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	KRAS	P01116	189 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	IGLV1-51	P01701	117 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	F2R	P25116	425 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	S100G	P29377	79 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	LPCAT3	Q6P1A2	487 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	FCAMR	Q8WWV6	532 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	DGCR14	Q96DF8	476 aa	Known RBP	13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	PEMT	Q9UBM1	199 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	EXTL2	Q9UBQ6	330 aa		13.82	□□□□□ -0.2
CYTH3-211	ENST00000495176	CGB1	A6NKQ9	187 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176		H0Y980	276 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	OR2C1	O95371	312 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	HIST1H1B	P16401	226 aa	Known RBP	13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	RCVRN	P35243	200 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	G6PC	P35575	357 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	OR2B8P	P59922	312 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	POU2AF1	Q16633	256 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	CLEC19A	Q6UXS0	136 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	IL34	Q6ZMJ4	242 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	COMMD9	Q9P000	198 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	NSG2	Q9Y328	171 aa		13.81	□□□□□ -0.2
CYTH3-211	ENST00000495176	RGS5	O15539	181 aa		13.8	□□□□□ -0.2
CYTH3-211	ENST00000495176	CRYGC	P07315	174 aa		13.8	□□□□□ -0.2
CYTH3-211	ENST00000495176	CSN3	P07498	182 aa		13.8	□□□□□ -0.2
CYTH3-211	ENST00000495176	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.8	□□□□□ -0.2
CYTH3-211	ENST00000495176	OR10W1	Q8NGF6	305 aa		13.8	□□□□□ -0.2
CYTH3-211	ENST00000495176	FANCD2OS	Q96PS1	177 aa		13.8	□□□□□ -0.2
CYTH3-211	ENST00000495176	ZC4H2	Q9NQZ6	224 aa		13.8	□□□□□ -0.2
CYTH3-211	ENST00000495176	KLK11	Q9UBX7	282 aa		13.8	□□□□□ -0.2
CYTH3-211	ENST00000495176		U3KQK5	164 aa		13.8	□□□□□ -0.2
CYTH3-211	ENST00000495176	MARCH11	A6NNE9	402 aa		13.79	□□□□□ -0.2
CYTH3-211	ENST00000495176	IFNA6	P05013	189 aa		13.79	□□□□□ -0.2
CYTH3-211	ENST00000495176	CTRB1	P17538	263 aa		13.79	□□□□□ -0.2
CYTH3-211	ENST00000495176	SPCS2	Q15005	226 aa		13.79	□□□□□ -0.2
CYTH3-211	ENST00000495176	CTRB2	Q6GPI1	263 aa		13.79	□□□□□ -0.2
CYTH3-211	ENST00000495176	OR52I2	Q8NH67	350 aa		13.79	□□□□□ -0.2
CYTH3-211	ENST00000495176	EEF1AKMT3	Q96AZ1	226 aa		13.79	□□□□□ -0.2
CYTH3-211	ENST00000495176	WWC2-AS2	Q96NR7	200 aa		13.79	□□□□□ -0.2
CYTH3-211	ENST00000495176	SELENOK	Q9Y6D0	94 aa		13.79	□□□□□ -0.2
CYTH3-211	ENST00000495176	TEX50	A0A1B0GTY4	177 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	CYB5B	O43169	146 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	GGCT	O75223	188 aa	Known RBP	13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	SNAPC5	O75971	98 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	FRMD6-AS1	P0C7T7	363 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	TRAPPC2	P0DI81	140 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	TRAPPC2B	P0DI82	140 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	OR13C7	P0DN81	318 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	PGAM2	P15259	253 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	ARL3	P36405	182 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	ALDH3B2	P48448	385 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	ZNF585B	Q52M93	769 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	TBC1D26	Q86UD7	250 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	SBSPON	Q8IVN8	264 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	QTRT1	Q9BXR0	403 aa	Known RBP	13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	SIGLEC8	Q9NYZ4	499 aa		13.78	□□□□□ -0.2
CYTH3-211	ENST00000495176	IGLC7	A0M8Q6	106 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	ZNF320	A2RRD8	509 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	IZUMO1R	A6ND01	250 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	MFSD2B	A6NFX1	497 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	FGF2	P09038	288 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	RNASE10	Q5GAN6	216 aa	Known RBP	13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	THOC7	Q6I9Y2	204 aa	Known RBP	13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	LCN12	Q6JVE5	192 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	SLC25A24	Q6NUK1	477 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	SGPP2	Q8IWX5	399 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	DYNLRB2	Q8TF09	96 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	C15orf40	Q8WUR7	153 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	ABHD1	Q96SE0	405 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	SRSF8	Q9BRL6	282 aa	Known RBP	13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	THYN1	Q9P016	225 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	TENM3	Q9P273	2699 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	OR51B2	Q9Y5P1	312 aa		13.77	□□□□□ -0.21
CYTH3-211	ENST00000495176	IGLV11-55	A0A075B6I3	123 aa		13.76	□□□□□ -0.21
CYTH3-211	ENST00000495176	CTDSP2	O14595	271 aa		13.76	□□□□□ -0.21
CYTH3-211	ENST00000495176	CD3D	P04234	171 aa		13.76	□□□□□ -0.21
CYTH3-211	ENST00000495176	CLEC3B	P05452	202 aa		13.76	□□□□□ -0.21
CYTH3-211	ENST00000495176	PI3	P19957	117 aa		13.76	□□□□□ -0.21
CYTH3-211	ENST00000495176	EDN2	P20800	178 aa		13.76	□□□□□ -0.21
CYTH3-211	ENST00000495176	MECP2	P51608	486 aa	Known RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms