RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 GPX8Q8TED1 209 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 BORCS5Q969J3 196 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 NAA50Q9GZZ1 169 aaKnown RBP13.71□□□□□ -0.21
PTPRU-207ENST00000492954 PLEKHA2Q9HB19 425 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 TMEM140Q9NV12 185 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 SIGLEC8Q9NYZ4 499 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 DMRT1Q9Y5R6 373 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 S4R3C0 116 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 HPGDSO60760 199 aa13.7□□□□□ -0.22
PTPRU-207ENST00000492954 PGLYRP1O75594 196 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-207ENST00000492954 HLA-AP01891 365 aaKnown RBP13.7□□□□□ -0.22
PTPRU-207ENST00000492954 IGHV4-30-4P0DP06 118 aa13.7□□□□□ -0.22
PTPRU-207ENST00000492954 ELK1P19419 428 aa13.7□□□□□ -0.22
PTPRU-207ENST00000492954 OR2B8PP59922 312 aa13.7□□□□□ -0.22
PTPRU-207ENST00000492954 COMMD9Q9P000 198 aa13.7□□□□□ -0.22
PTPRU-207ENST00000492954 PEMTQ9UBM1 199 aa13.7□□□□□ -0.22
PTPRU-207ENST00000492954 KMT2CQ8NEZ4 4911 aaKnown RBP13.7□□□□□ -0.22
PTPRU-207ENST00000492954 SMIM31A0A1B0GVY4 71 aa13.69□□□□□ -0.22
PTPRU-207ENST00000492954 IZUMO1RA6ND01 250 aa13.69□□□□□ -0.22
PTPRU-207ENST00000492954 H0Y980 276 aa13.69□□□□□ -0.22
PTPRU-207ENST00000492954 DHFRP00374 187 aa13.69□□□□□ -0.22
PTPRU-207ENST00000492954 RORCP51449 518 aa13.69□□□□□ -0.22
PTPRU-207ENST00000492954 ADAMTSL5Q6ZMM2 481 aa13.69□□□□□ -0.22
PTPRU-207ENST00000492954 OR6F1Q8NGZ6 308 aa13.69□□□□□ -0.22
PTPRU-207ENST00000492954 CCDC140Q96MF4 163 aa13.69□□□□□ -0.22
PTPRU-207ENST00000492954 CMTM3Q96MX0 182 aa13.69□□□□□ -0.22
PTPRU-207ENST00000492954 IGLC7A0M8Q6 106 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 GGCTO75223 188 aaKnown RBP13.68□□□□□ -0.22
PTPRU-207ENST00000492954 GABARAPO95166 117 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 DEFA4P12838 97 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 F2RP25116 425 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 ERVK-16P61578 105 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 CTF1Q16619 201 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 KLK9Q2XQG4 91 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 FAM209BQ5JX69 171 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 LCN12Q6JVE5 192 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 CMTM1Q8IZ96 169 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 COMMD5Q9GZQ3 224 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 SCPEP1Q9HB40 452 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 KLK9Q9UKQ9 250 aa13.68□□□□□ -0.22
PTPRU-207ENST00000492954 IGLV11-55A0A075B6I3 123 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 MARCH11A6NNE9 402 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 GPR31O00270 319 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 OR2C1O95371 312 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 HIST1H1BP16401 226 aaKnown RBP13.67□□□□□ -0.22
PTPRU-207ENST00000492954 LPAR6P43657 344 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 MECP2P51608 486 aaKnown RBP13.67□□□□□ -0.22
PTPRU-207ENST00000492954 PHLDA2Q53GA4 152 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 CLEC19AQ6UXS0 136 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 SGPP2Q8IWX5 399 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 Q8N402 240 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 OR10W1Q8NGF6 305 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 FCAMRQ8WWV6 532 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 DGCR14Q96DF8 476 aaKnown RBP13.67□□□□□ -0.22
PTPRU-207ENST00000492954 RCHY1Q96PM5 261 aa13.67□□□□□ -0.22
PTPRU-207ENST00000492954 THAP7Q9BT49 309 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-207ENST00000492954 MFSD2BA6NFX1 497 aa13.66□□□□□ -0.22
PTPRU-207ENST00000492954 FGF2P09038 288 aa13.66□□□□□ -0.22
PTPRU-207ENST00000492954 EDN2P20800 178 aa13.66□□□□□ -0.22
PTPRU-207ENST00000492954 RCVRNP35243 200 aa13.66□□□□□ -0.22
PTPRU-207ENST00000492954 ARL3P36405 182 aa13.66□□□□□ -0.22
PTPRU-207ENST00000492954 TSPAN5P62079 268 aa13.66□□□□□ -0.22
PTPRU-207ENST00000492954 ZNF585BQ52M93 769 aa13.66□□□□□ -0.22
PTPRU-207ENST00000492954 RNASE12Q5GAN4 147 aaKnown RBP13.66□□□□□ -0.22
PTPRU-207ENST00000492954 GPR107Q5VW38 600 aa13.66□□□□□ -0.22
PTPRU-207ENST00000492954 EEF1AKMT3Q96AZ1 226 aa13.66□□□□□ -0.22
PTPRU-207ENST00000492954 SRSF8Q9BRL6 282 aaKnown RBP13.66□□□□□ -0.22
PTPRU-207ENST00000492954 QTRT1Q9BXR0 403 aaKnown RBP13.66□□□□□ -0.22
PTPRU-207ENST00000492954 C19orf73Q9NVV2 129 aa13.66□□□□□ -0.22
PTPRU-207ENST00000492954 FAM25AB3EWG3 89 aa13.65□□□□□ -0.22
PTPRU-207ENST00000492954 FAM25CB3EWG5 89 aa13.65□□□□□ -0.22
PTPRU-207ENST00000492954 FAM25GB3EWG6 89 aa13.65□□□□□ -0.22
PTPRU-207ENST00000492954 KRASP01116 189 aa13.65□□□□□ -0.22
PTPRU-207ENST00000492954 G6PCP35575 357 aa13.65□□□□□ -0.22
PTPRU-207ENST00000492954 CD300EQ496F6 205 aaPredicted RBP13.65□□□□□ -0.22
PTPRU-207ENST00000492954 MZT2AQ6P582 158 aa13.65□□□□□ -0.22
PTPRU-207ENST00000492954 GTSCR1Q86UQ5 136 aa13.65□□□□□ -0.22
PTPRU-207ENST00000492954 DYNLRB2Q8TF09 96 aa13.65□□□□□ -0.22
PTPRU-207ENST00000492954 NSG2Q9Y328 171 aa13.65□□□□□ -0.22
PTPRU-207ENST00000492954 TEX50A0A1B0GTY4 177 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 C2orf70A6NJV1 201 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 A8MZ25 164 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 M0QYG6 137 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 LGALS9O00182 355 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 TRAPPC2P0DI81 140 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 TRAPPC2BP0DI82 140 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 GPHB5Q86YW7 130 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 OR2K2Q8NGT1 345 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 AP3S1Q92572 193 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 ZMAT4Q9H898 229 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 ZC4H2Q9NQZ6 224 aa13.64□□□□□ -0.23
PTPRU-207ENST00000492954 TRBV7-1A0A0A6YYK4 115 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 OR13C7P0DN81 318 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 FOLR2P14207 255 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 ZNF182P17025 639 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-207ENST00000492954 WT1-ASQ06250 92 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 DEFB114Q30KQ6 69 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 THOC7Q6I9Y2 204 aaKnown RBP13.63□□□□□ -0.23
PTPRU-207ENST00000492954 LPCAT3Q6P1A2 487 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 TBC1D26Q86UD7 250 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 547.5 ms