RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	UBE2K	P61086	200 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	POLR2G	P62487	172 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	UBA52	P62987	128 aa	Known RBP	10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	BAX	Q07812	192 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	KLRD1	Q13241	179 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	AARD	Q4LEZ3	155 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	OR4A47	Q6IF82	309 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	HCP5	Q6MZN7	132 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	SSX9	Q7RTT3	188 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	MRPL41	Q8IXM3	137 aa	Known RBP	10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	TEX45	Q8NA69	505 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	SMIM8	Q96KF7	97 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	PRDM13	Q9H4Q3	707 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	ESM1	Q9NQ30	184 aa		10.85	□□□□□ -0.67
NUP188-208	ENST00000491502	CENPVL3	A0A0U1RRI6	287 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	CEBPZOS	A8MTT3	80 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	CLDN34	H7C241	214 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	UPK2	O00526	184 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	NPFF	O15130	113 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	CHST1	O43916	411 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	IGKV1-16	P04430	117 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	CXCL2	P19875	107 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	CAV2	P51636	162 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	OPCML	Q14982	345 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	LAMTOR1	Q6IAA8	161 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502		Q6ZRM9	215 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	STX12	Q86Y82	276 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	OR2C3	Q8N628	320 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	OR2T10	Q8NGZ9	312 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	ZDHHC16	Q969W1	377 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	ZNF48	Q96MX3	618 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	ARPC5L	Q9BPX5	153 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	MAGT1	Q9H0U3	335 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	HIPK2	Q9H2X6	1198 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	FOXA2	Q9Y261	457 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	ZNF257	Q9Y2Q1	563 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	HILPDA	Q9Y5L2	63 aa		10.84	□□□□□ -0.67
NUP188-208	ENST00000491502	IGHV1-69D	A0A0B4J2H0	117 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502		A0A1W2PPI3	338 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	TMEM89	A2RUT3	159 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	C15orf61	A6NNL5	157 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	TIMM23	O14925	209 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	BCL2L11	O43521	198 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	TSC22D2	O75157	780 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	KBTBD11	O94819	623 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	MOS	P00540	346 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	IGHV1-69	P01742	117 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	FAM106CP	P0CH98	169 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	MAS1L	P35410	378 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	DLX1	P56177	255 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	ATP5I	P56385	69 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	HSPE1	P61604	102 aa	Known RBP	10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	RELB	Q01201	579 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	DIAPH2-AS1	Q14236	149 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	HABP2	Q14520	560 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	C12orf54	Q6X4T0	127 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	BRD3OS	Q6XYD6	125 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	SLC51B	Q86UW2	128 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	PUSL1	Q8N0Z8	303 aa	Known RBP	10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	OR5B3	Q8NH48	314 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	DTD1	Q8TEA8	209 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	COMMD5	Q9GZQ3	224 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	LYRM2	Q9NU23	88 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP188-208	ENST00000491502	KIAA1456	Q9P272	454 aa		10.83	□□□□□ -0.68
NUP188-208	ENST00000491502		A0A1W2PRD5	423 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502		A0A1W2PRF3	423 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502		A0A1W2PRM7	423 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	DNAJC9-AS1	A6NH13	148 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	ACTL6B	O94805	426 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	OR9G9	P0C7N8	305 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	SAA1	P0DJI8	122 aa	Predicted RBP	10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	HKR1	P10072	659 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	COMP	P49747	757 aa	Predicted RBP	10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	RPL8	P62917	257 aa	Known RBP	10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	SSX2	Q16385	188 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	IZUMO4	Q1ZYL8	232 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	DEFB112	Q30KQ8	113 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	THNSL2	Q86YJ6	484 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	PDZD9	Q8IXQ8	264 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	MMD2	Q8IY49	270 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	VKORC1L1	Q8N0U8	176 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	OR8H1	Q8NGG4	311 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	TMEM167A	Q8TBQ9	72 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	RBKS	Q9H477	322 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	TMEM14B	Q9NUH8	114 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	PSENEN	Q9NZ42	101 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	C1RL	Q9NZP8	487 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	FAM96B	Q9Y3D0	163 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	OR51B2	Q9Y5P1	312 aa		10.82	□□□□□ -0.68
NUP188-208	ENST00000491502	DNHD1	Q96M86	4753 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	IGHV3-72	A0A0B4J1Y9	119 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502		A0A1W2PN81	502 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	RNF222	A6NCQ9	220 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	IFNA7	P01567	189 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	RNASE1	P07998	156 aa	Known RBP	10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	IL6R	P08887	468 aa	Predicted RBP	10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	CHRNA7	P36544	502 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms