RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 OR4C12Q96R67 309 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 ABHD1Q96SE0 405 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 ELOVL1Q9BW60 279 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 MIXL1Q9H2W2 232 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 TMEM140Q9NV12 185 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 DPPA5A6NC42 116 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 REG1AP05451 166 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 CRYGCP07315 174 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 PSMB6P28072 239 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 LPAR6P43657 344 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 SYNJ2BPP57105 145 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 OR2B8PP59922 312 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 RPEL1Q2QD12 228 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 C15orf32Q32M92 178 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 ZNF585BQ52M93 769 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 PHLDA2Q53GA4 152 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 C11orf87Q6NUJ2 197 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 IL34Q6ZMJ4 242 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 OR9G4Q8NGQ1 327 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 OR52I2Q8NH67 350 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 FCAMRQ8WWV6 532 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 FANCD2OSQ96PS1 177 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 RSRP1Q9BUV0 290 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 COMMD9Q9P000 198 aa9.86□□□□□ -0.83
HDAC1-209ENST00000484305 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.85□□□□□ -0.83
HDAC1-209ENST00000484305 MARCH11A6NNE9 402 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 BMPR1BO00238 502 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 CTDSP2O14595 271 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 RGS5O15539 181 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 NDUFB8O95169 186 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 CTRB1P17538 263 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 VAX1Q5SQQ9 334 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 CTRB2Q6GPI1 263 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 LPCAT3Q6P1A2 487 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 LAX1Q8IWV1 398 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 OR6Q1Q8NGQ2 317 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 COMMD5Q9GZQ3 224 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 MTFP1Q9UDX5 166 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 FBXL7Q9UJT9 491 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 DMRT1Q9Y5R6 373 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 DNAH9Q9NYC9 4486 aa9.85□□□□□ -0.83
HDAC1-209ENST00000484305 IGLC7A0M8Q6 106 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 PPP5D1E7EU14 171 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 TPPPO94811 219 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 KRASP01116 189 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 IGLV1-51P01701 117 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 CD3DP04234 171 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 FGF2P09038 288 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 GP9P14770 177 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 G6PCP35575 357 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 TMBIM6P55061 237 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 UCP3P55916 312 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 ERVK-16P61578 105 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 KLK9Q2XQG4 91 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 TBC1D26Q86UD7 250 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 OR10W1Q8NGF6 305 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 DYNC2LI1Q8TCX1 351 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 RAB2BQ8WUD1 216 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 KLK9Q9UKQ9 250 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 S4R3C0 116 aa9.84□□□□□ -0.83
HDAC1-209ENST00000484305 TEX50A0A1B0GTY4 177 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 DHFRP00374 187 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 IGHV3-23P01764 117 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 CSN3P07498 182 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 DEFA4P12838 97 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 RPL5P46777 297 aaKnown RBP9.83□□□□□ -0.84
HDAC1-209ENST00000484305 TATDN3Q17R31 274 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 RNASE10Q5GAN6 216 aaKnown RBP9.83□□□□□ -0.84
HDAC1-209ENST00000484305 SLC38A6Q8IZM9 456 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 OR4D10Q8NGI6 311 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 CCDC140Q96MF4 163 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 NSG2Q9Y328 171 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 SMAD5-AS1Q9Y6J3 95 aa9.83□□□□□ -0.84
HDAC1-209ENST00000484305 IGLV11-55A0A075B6I3 123 aa9.82□□□□□ -0.84
HDAC1-209ENST00000484305 HLA-AP01891 365 aaKnown RBP9.82□□□□□ -0.84
HDAC1-209ENST00000484305 IFNA6P05013 189 aa9.82□□□□□ -0.84
HDAC1-209ENST00000484305 TRAPPC2P0DI81 140 aa9.82□□□□□ -0.84
HDAC1-209ENST00000484305 TRAPPC2BP0DI82 140 aa9.82□□□□□ -0.84
HDAC1-209ENST00000484305 HIST1H1BP16401 226 aaKnown RBP9.82□□□□□ -0.84
HDAC1-209ENST00000484305 S100GP29377 79 aa9.82□□□□□ -0.84
HDAC1-209ENST00000484305 LHFPL1Q86WI0 220 aa9.82□□□□□ -0.84
HDAC1-209ENST00000484305 C15orf40Q8WUR7 153 aa9.82□□□□□ -0.84
HDAC1-209ENST00000484305 BCL7BQ9BQE9 202 aa9.82□□□□□ -0.84
HDAC1-209ENST00000484305 SRSF8Q9BRL6 282 aaKnown RBP9.82□□□□□ -0.84
HDAC1-209ENST00000484305 QTRT1Q9BXR0 403 aaKnown RBP9.82□□□□□ -0.84
HDAC1-209ENST00000484305 NDUFA4L2Q9NRX3 87 aa9.82□□□□□ -0.84
HDAC1-209ENST00000484305 FAM212BQ9NTI7 297 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-209ENST00000484305 CCDC59Q9P031 241 aaKnown RBP9.82□□□□□ -0.84
HDAC1-209ENST00000484305 DBX1A6NMT0 343 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 H3BMQ9 156 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 GABARAPH6UMI1 98 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 OR2C1O95371 312 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 IGKV1-39P01597 117 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 CD74P04233 296 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 IGKV1D-39P04432 117 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 PI3P19957 117 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 TBPP20226 339 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 WT1-ASQ06250 92 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 FAM209BQ5JX69 171 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 CLEC19AQ6UXS0 136 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms