RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	GLDN	Q6ZMI3	551 aa	Predicted RBP	3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	TBC1D26	Q86UD7	250 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	SGPP2	Q8IWX5	399 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	DRAXIN	Q8NBI3	349 aa	Predicted RBP	3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	NECAP1	Q8NC96	275 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	ADAD2	Q8NCV1	583 aa	Known RBP	3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	OR4D10	Q8NGI6	311 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	OR1L8	Q8NGR8	309 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	OR51H1	Q8NH63	302 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	GLYATL2	Q8WU03	294 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	RBPMS	Q93062	196 aa	Known RBP	3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	R3HDM4	Q96D70	268 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	RITA1	Q96K30	269 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	P2RX4	Q99571	388 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	RTBDN	Q9BSG5	229 aa	Predicted RBP	3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	MCRIP2	Q9BUT9	160 aa	Known RBP	3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	QTRT1	Q9BXR0	403 aa	Known RBP	3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	COMMD5	Q9GZQ3	224 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	NAA60	Q9H7X0	242 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	ZNF430	Q9H8G1	570 aa	Predicted RBP	3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	HRASLS	Q9HDD0	168 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	TMEM140	Q9NV12	185 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	GAR1	Q9NY12	217 aa	Known RBP	3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	THYN1	Q9P016	225 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525	VSIG4	Q9Y279	399 aa		3.98	□□□□□ -1.77
HDAC6-223	ENST00000480525		A0A1W2PN81	502 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	IGLC7	A0M8Q6	106 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	TEX22	C9J3V5	150 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525		I3L521	148 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	UPK1B	O75841	260 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	SCAF4	O95104	1147 aa	Known RBP	3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	CTRB1	P17538	263 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	CNTFR	P26992	372 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	PSMB6	P28072	239 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	BTC	P35070	178 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	CHRNA7	P36544	502 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	RPL27A	P46776	148 aa	Known RBP	3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	INPP1	P49441	399 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	RAB9A	P51151	201 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	INSL3	P51460	131 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	OR2B8P	P59922	312 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	KRTAP10-3	P60369	221 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	PRCD	Q00LT1	54 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	KIAA0141	Q14154	515 aa	Predicted RBP	3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	HNF4G	Q14541	408 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	BAK1	Q16611	211 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	BSX	Q3C1V8	233 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	NMS	Q5H8A3	153 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	KPRP	Q5T749	579 aa	Predicted RBP	3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	ASPHD1	Q5U4P2	390 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	CTRB2	Q6GPI1	263 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525		Q6ZS46	218 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	NOXA1	Q86UR1	476 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	ZNF695	Q8IW36	515 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	CENPS	Q8N2Z9	138 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	ZNF491	Q8N8L2	437 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	DUSP18	Q8NEJ0	188 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	OR1P1	Q8NH06	330 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	MARCH1	Q8TCQ1	289 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	VN1R17P	Q8TDU5	208 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	CXorf58	Q96LI9	332 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	FYTTD1	Q96QD9	318 aa	Known RBP	3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	NDUFA4L2	Q9NRX3	87 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	TNFRSF19	Q9NS68	423 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	SIGLEC8	Q9NYZ4	499 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	TMED3	Q9Y3Q3	217 aa		3.97	□□□□□ -1.77
HDAC6-223	ENST00000480525	IGLV11-55	A0A075B6I3	123 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	TRBV7-1	A0A0A6YYK4	115 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525		A0A1B0GU03	582 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	DBX1	A6NMT0	343 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	FCN1	O00602	326 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	PLA2G10	O15496	165 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	LYRM1	O43325	122 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	SOX15	O60248	233 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	PRAF2	O60831	178 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	SNAPC5	O75971	98 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	S1PR2	O95136	353 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	CNIH1	O95406	144 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	IGKV1-39	P01597	117 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	IGKV1D-39	P04432	117 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	LGALS1	P09382	135 aa	Known RBP	3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	OR8U8	P0C7N1	319 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	TRAPPC2	P0DI81	140 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	TRAPPC2B	P0DI82	140 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	PGAM2	P15259	253 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	ZP3	P21754	424 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	LPAR6	P43657	344 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	CCR6	P51684	374 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	LINC00205	P59089	165 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	HSPE1	P61604	102 aa	Known RBP	3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	SUPT4H1	P63272	117 aa	Known RBP	3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	SRSF2	Q01130	221 aa	Known RBP	3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	TMEM187	Q14656	261 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	SCGB2B2	Q4G0G5	96 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	MZT2B	Q6NZ67	158 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	ZNF343	Q6P1L6	599 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	TMEM65	Q6PI78	240 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	UNQ5815/PRO19632	Q6UWF5	114 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	TREML4	Q6UXN2	200 aa		3.96	□□□□□ -1.78
HDAC6-223	ENST00000480525	H2BFWT	Q7Z2G1	175 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms