RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 DEFB124Q8NES8 71 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 RPP21Q9H633 154 aaKnown RBP9.41□□□□□ -0.9
EWSR1-216ENST00000479135 PHRF1Q9P1Y6 1649 aaKnown RBP9.41□□□□□ -0.9
EWSR1-216ENST00000479135 SCN8AQ9UQD0 1980 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 SPTBP11277 2137 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 UPK2O00526 184 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 RPL35AP18077 110 aaKnown RBP9.41□□□□□ -0.9
EWSR1-216ENST00000479135 SSBP1Q04837 148 aaKnown RBP9.41□□□□□ -0.9
EWSR1-216ENST00000479135 H1FOOQ8IZA3 346 aaPredicted RBP9.41□□□□□ -0.9
EWSR1-216ENST00000479135 SLX4Q8IY92 1834 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 GATAD1Q8WUU5 269 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 HIST1H2BAQ96A08 127 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 IGHV1OR21-1A0A087WYE8 117 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 IGHV1-45A0A0A0MS14 117 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 A0A0G2JMM0 328 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 A0A1W2PPB8 328 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 HMSDA8MTL9 139 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 A8MWP6 167 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 KIR3DP1A8MWS1 328 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 CLEC19AQ6UXS0 136 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 C17orf47Q8NEP4 570 aa9.41□□□□□ -0.9
EWSR1-216ENST00000479135 CISD1Q9NZ45 108 aaKnown RBP9.41□□□□□ -0.9
EWSR1-216ENST00000479135 SRSF7Q16629 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
EWSR1-216ENST00000479135 IGHV4OR15-8A0A075B7B6 117 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 A0A087WW49 117 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 hDV102S1A0JD36 115 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 VEGFBP49765 207 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 TMEM170AQ8WVE7 144 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 B5MCH6 92 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 ZG16O60844 167 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 CGAP01215 116 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 CXCL2P19875 107 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 UNC119Q13432 240 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 KLF16Q9BXK1 252 aaPredicted RBP9.4□□□□□ -0.9
EWSR1-216ENST00000479135 RNASE7Q9H1E1 156 aaKnown RBP9.4□□□□□ -0.9
EWSR1-216ENST00000479135 RPRMQ9NS64 109 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 NEUROG3Q9Y4Z2 214 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 KIAA0100Q14667 2235 aaKnown RBP9.4□□□□□ -0.9
EWSR1-216ENST00000479135 IGHV1-69-2A0A0G2JMI3 117 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 ORMDL3Q8N138 153 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 MZB1Q8WU39 189 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 C21orf62Q9NYP8 219 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 HDGFL3Q9Y3E1 203 aa9.4□□□□□ -0.9
EWSR1-216ENST00000479135 OGG1O15527 345 aa9.4□□□□□ -0.91
EWSR1-216ENST00000479135 CLLU1OSQ5K130 101 aa9.4□□□□□ -0.91
EWSR1-216ENST00000479135 OR11H4Q8NGC9 324 aa9.4□□□□□ -0.91
EWSR1-216ENST00000479135 TMEM171Q8WVE6 324 aa9.4□□□□□ -0.91
EWSR1-216ENST00000479135 SLC25A39Q9BZJ4 359 aaPredicted RBP9.4□□□□□ -0.91
EWSR1-216ENST00000479135 CEACAM8P31997 349 aaPredicted RBP9.4□□□□□ -0.91
EWSR1-216ENST00000479135 CNTRLQ7Z7A1 2325 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 NUP205Q92621 2012 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 PLPP3O14495 311 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 SERF1AO75920 110 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 ASCL5Q7RTU5 278 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 SMIM20Q8N5G0 67 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 OR51G1Q8NGK1 321 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 CCL21O00585 134 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 C6orf226Q5I0X4 101 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 EEF1AKMT3Q96AZ1 226 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 A0A087WX48 190 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 MMP23AO75900 390 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 DCAF12L2Q5VW00 463 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 C1orf159Q96HA4 380 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 TMEM238C9JI98 176 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 EGR4Q05215 589 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 ZNF79Q15937 498 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 SYS1Q8N2H4 156 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 ZNF576Q9H609 170 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 LEPROTO15243 131 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 CAPZBP47756 277 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 RND3P61587 244 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 SOCS3O14543 225 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 TBX6O95947 436 aaPredicted RBP9.39□□□□□ -0.91
EWSR1-216ENST00000479135 COX6B1P14854 86 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 NDPQ00604 133 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 TAL2Q16559 108 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 RIMKLAQ8IXN7 391 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 BCL6BQ8N143 479 aaPredicted RBP9.39□□□□□ -0.91
EWSR1-216ENST00000479135 FER1L6-AS1Q8NA97 138 aa9.39□□□□□ -0.91
EWSR1-216ENST00000479135 PFN2P35080 140 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 RCC1LQ96I51 464 aaKnown RBP9.38□□□□□ -0.91
EWSR1-216ENST00000479135 TSSC4Q9Y5U2 329 aaPredicted RBP9.38□□□□□ -0.91
EWSR1-216ENST00000479135 CICQ96RK0 1608 aaPredicted RBP9.38□□□□□ -0.91
EWSR1-216ENST00000479135 DSPPQ9NZW4 1301 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 SCTP09683 121 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 PLPP2O43688 288 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 PRSS23O95084 383 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 NRN1Q9NPD7 142 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 TMEM8BA6NDV4 472 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 ZNF826PQ6ZT77 177 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 SPRED2Q7Z698 418 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 NKAPP1Q8N9T2 125 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 MORN4Q8NDC4 146 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 CNRIP1Q96F85 164 aaPredicted RBP9.38□□□□□ -0.91
EWSR1-216ENST00000479135 CALYQ9NYX4 217 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 MYO9BQ13459 2157 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 TEX45Q8NA69 505 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 SPXQ9BT56 116 aa9.38□□□□□ -0.91
EWSR1-216ENST00000479135 OTOFQ9HC10 1997 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 F8VVB4 439 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms