RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 CATR1Q13166 79 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 TNXAQ16473 311 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 DEFB136Q30KP8 78 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF585BQ52M93 769 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 AKIRIN2Q53H80 203 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 CXorf66Q5JRM2 361 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-208ENST00000476739 PLET1Q6UQ28 207 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 TBC1D26Q86UD7 250 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 ARRDC1Q8N5I2 433 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 KLHL30-AS1Q8NEE0 82 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 OR5T1Q8NG75 326 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 OR4F17Q8NGA8 305 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 OR4C16Q8NGL9 310 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 MYOZ3Q8TDC0 251 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 RHOVQ96L33 236 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 OR2A7Q96R45 310 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 OR4F4Q96R69 305 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 GNB4Q9HAV0 340 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 ZFP57Q9NU63 452 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 VWFP04275 2813 aa7.55□□□□□ -1.2
HDAC3-208ENST00000476739 MGAM2Q2M2H8 2515 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 A0A1B0GW64 132 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 ANKRD20A5PA0PJZ0 165 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 MSGN1A6NI15 193 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF98A6NK75 572 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 NUDT19A8MXV4 375 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 TSPAN4O14817 238 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 RBFOX2O43251 390 aaKnown RBP eCLIP7.54□□□□□ -1.2
HDAC3-208ENST00000476739 IL6RP08887 468 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-208ENST00000476739 AKAIN1P0CW23 69 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 TBPP20226 339 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 LPAR6P43657 344 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 DEFA5Q01523 94 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 BAK1Q16611 211 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 SCGB2B2Q4G0G5 96 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 OR4A47Q6IF82 309 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 TEX261Q6UWH6 196 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 C1QL4Q86Z23 238 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF695Q8IW36 515 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 CMTM1Q8IZ96 169 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 ZNF491Q8N8L2 437 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 OR13C8Q8NGS7 320 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 TERB2Q8NHR7 220 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 TMEM167AQ8TBQ9 72 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 SRSF12Q8WXF0 261 aaKnown RBP7.54□□□□□ -1.2
HDAC3-208ENST00000476739 RAX2Q96IS3 184 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 MS4A10Q96PG2 267 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 OR5B12Q96R08 314 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 THAP7Q9BT49 309 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-208ENST00000476739 SLC2A9Q9NRM0 540 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 PPP1R14DQ9NXH3 145 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 UBQLN2Q9UHD9 624 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 FOXA2Q9Y261 457 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-208ENST00000476739 U3KQ87 197 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 FBN3Q75N90 2809 aa7.54□□□□□ -1.2
HDAC3-208ENST00000476739 PKD1L1Q8TDX9 2849 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 CGB1A6NKQ9 187 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 RBMXL2O75526 392 aaKnown RBP7.53□□□□□ -1.2
HDAC3-208ENST00000476739 HRASP01112 189 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 IGKV1-39P01597 117 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 IGKV1D-39P04432 117 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 PGAM2P15259 253 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 NQO2P16083 231 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 F2RP25116 425 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 CDX1P47902 265 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-208ENST00000476739 PIGPP57054 158 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 TAS2R31P59538 309 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 TMEM267Q0VDI3 215 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-208ENST00000476739 POU2AF1Q16633 256 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 PYDC2Q56P42 97 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 LPCAT3Q6P1A2 487 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 TMEM65Q6PI78 240 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 C19orf35Q6ZS72 473 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 NRARPQ7Z6K4 114 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 MRPL41Q8IXM3 137 aaKnown RBP7.53□□□□□ -1.2
HDAC3-208ENST00000476739 MMD2Q8IY49 270 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 Q8N402 240 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 TCTEX1D1Q8N7M0 179 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 DUSP18Q8NEJ0 188 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 OR51S1Q8NGJ8 323 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 MARCH1Q8TCQ1 289 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 SRRQ9GZT4 340 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 ALX4Q9H161 411 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-208ENST00000476739 PLEKHA2Q9HB19 425 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 RANGRFQ9HD47 186 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-208ENST00000476739 TMEM140Q9NV12 185 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 BET1LQ9NYM9 111 aa7.53□□□□□ -1.2
HDAC3-208ENST00000476739 MARCH11A6NNE9 402 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 DISC1C4P0D8 188 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 TEX22C9J3V5 150 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 F8W036 122 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 G3V4G9 280 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 UPK2O00526 184 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 MPPED1O15442 326 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 KRASP01116 189 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 IGHV3-11P01762 117 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 PF4P02776 101 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 PRH1P02810 166 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 IFNA4P05014 189 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 OR9G9P0C7N8 305 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms