RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 IGLL5B9A064 214 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 C15orf65H3BRN8 121 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 PANO1I0J062 215 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 FAAHO00519 579 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 APOMO95445 188 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 IGLV3-27P01718 113 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 HLA-DRB1P01911 266 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 TRGV3P03979 118 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 LINC00869P0C866 280 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 NPY1RP25929 384 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 SNRPD2P62316 118 aaKnown RBP2.72□□□□□ -1.97
VPS13D-207ENST00000476169 GNG3P63215 75 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 IL15RAQ13261 267 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 ENDOGQ14249 297 aaKnown RBP2.72□□□□□ -1.97
VPS13D-207ENST00000476169 ALX1Q15699 326 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 COL24A1Q17RW2 1714 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 IAH1Q2TAA2 248 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-207ENST00000476169 PLPPR5Q32ZL2 321 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 ZCWPW2Q504Y3 356 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 UBR3Q6ZT12 1888 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 OOSP2Q86WS3 158 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 UMODL1-AS1Q8N2C9 162 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF615Q8N8J6 731 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 ZFP62Q8NB50 900 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-207ENST00000476169 RAB2BQ8WUD1 216 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 DYDC1Q8WWB3 177 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 ACOT12Q8WYK0 555 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 GNPNAT1Q96EK6 184 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-207ENST00000476169 TMEM147Q9BVK8 224 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 COMMD5Q9GZQ3 224 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 BOLA2Q9H3K6 86 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 GPR84Q9NQS5 396 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 BIN3Q9NQY0 253 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 PRTFDC1Q9NRG1 225 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 NRXN2Q9P2S2 1712 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 CELA1Q9UNI1 258 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 TUBGCP6Q96RT7 1819 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 KDM3BQ7LBC6 1761 aa2.72□□□□□ -1.97
VPS13D-207ENST00000476169 IGSF9BQ9UPX0 1349 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 TRAV26-2A0A0B4J265 109 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 ZNF729A6NN14 1252 aaPredicted RBP2.71□□□□□ -1.98
VPS13D-207ENST00000476169 PPP5D1E7EU14 171 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 COX7A2LO14548 114 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 HMGB3O15347 200 aaKnown RBP2.71□□□□□ -1.98
VPS13D-207ENST00000476169 MED6O75586 246 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 PDYNP01213 254 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 IFNA14P01570 189 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 CRABP2P29373 138 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 SERPINB1P30740 379 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 CAV1Q03135 178 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 TNFRSF9Q07011 255 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 APOFQ13790 326 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 GRK1Q15835 563 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 ZFP2Q6ZN57 461 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 STX19Q8N4C7 294 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 OR8B12Q8NGG6 310 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 GNPDA2Q8TDQ7 276 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 CT55Q8WUE5 264 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 TBX5Q99593 518 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 CCL13Q99616 98 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 C1orf50Q9BV19 199 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 COQ4Q9Y3A0 265 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 MRPS16Q9Y3D3 137 aaKnown RBP2.71□□□□□ -1.98
VPS13D-207ENST00000476169 PHLDA3Q9Y5J5 127 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 BAZ2AQ9UIF9 1905 aaKnown RBP2.71□□□□□ -1.98
VPS13D-207ENST00000476169 KMT2EQ8IZD2 1858 aa2.71□□□□□ -1.98
VPS13D-207ENST00000476169 TP53BP1Q12888 1972 aaPredicted RBP2.7□□□□□ -1.98
VPS13D-207ENST00000476169 ATRXP46100 2492 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 ZNF609O15014 1411 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 CROCCQ5TZA2 2017 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 SCN11AQ9UI33 1791 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 IGHV3OR15-7A0A075B7D8 119 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 IGKV1-12A0A0C4DH73 117 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 EXOC1LA0A1B0GW35 172 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 S1PR2O95136 353 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 IGKV1D-12P01611 117 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 IGHMP01871 453 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 CRHP06850 196 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 PFN1P07737 140 aaKnown RBP2.7□□□□□ -1.98
VPS13D-207ENST00000476169 SULT1A3P0DMM9 295 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 SULT1A4P0DMN0 295 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 INAFM2P0DMQ5 153 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 IDO1P14902 403 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 ZNF32P17041 273 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 MPV17P39210 176 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 AKR1C2P52895 323 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 TAS2R45P59539 299 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 RPS20P60866 119 aaKnown RBP2.7□□□□□ -1.98
VPS13D-207ENST00000476169 FKBP1AP62942 108 aaKnown RBP2.7□□□□□ -1.98
VPS13D-207ENST00000476169 TFAMQ00059 246 aaKnown RBP2.7□□□□□ -1.98
VPS13D-207ENST00000476169 HOXC5Q00444 222 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 DEFB115Q30KQ5 88 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 SCXQ7RTU7 201 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 SAXO1Q8IYX7 474 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 PACRGLQ8N7B6 248 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 TMEM105Q8N8V8 129 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 OR52L1Q8NGH7 329 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 HIST1H2BAQ96A08 127 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 FOPNLQ96NB1 174 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms