RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 A0A1W2PPH5 198 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 COLCA2A8K830 154 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF727A8MUV8 499 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 TMEM250H0YL14 139 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 CLDN34H7C241 214 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 NDUFB3O43676 98 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 ZG16O60844 167 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 LHBP01229 141 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 CD55P08174 381 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 IL3RAP26951 378 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 CD1BP29016 333 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 CDC34P49427 236 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 RPL30P62888 115 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 DLK1P80370 383 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 MEF2BQ02080 365 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 FAM27E3Q08E93 113 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 HNF4GQ14541 408 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 BEAN1Q3B7T3 259 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 LRRC10Q5BKY1 277 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 NCR3LG1Q68D85 454 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 STUMQ69YW2 141 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 SSX9Q7RTT3 188 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 LRP11Q86VZ4 500 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 LYG1Q8N1E2 194 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 CYB561D1Q8N8Q1 229 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNRF1Q8ND25 227 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 RND1Q92730 232 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 HIST1H2BAQ96A08 127 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 MALSU1Q96EH3 234 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 TXNDC17Q9BRA2 123 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 QTRT1Q9BXR0 403 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 NPCDR1Q9BY65 106 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 IFI27L2Q9H2X8 130 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 SAP30LQ9HAJ7 183 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 PLEKHA3Q9HB20 300 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 TMEM140Q9NV12 185 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 DKK2Q9UBU2 259 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 NAT8Q9UHE5 227 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 LINC00312Q9Y6C7 94 aa4.84□□□□□ -1.63
ATPAF1-204ENST00000474020 SPEGQ15772 3267 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 SHANK1Q9Y566 2161 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 PPIAL4EA0A075B759 164 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 LINC00473A8K010 186 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 C17orf100A8MU93 164 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 PPIAL4DF5H284 164 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 F6UZH7 168 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 NDUFA2O43678 99 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 PDE6DO43924 150 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 CYB5R3P00387 301 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 OPN1MWP04001 364 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 OR4A8P0C604 315 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 PPIAL4FP0DN26 164 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 OPN1MW2P0DN77 364 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 OPN1MW3P0DN78 364 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 OPRK1P41145 380 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 AKR1C3P42330 323 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 RPL35P42766 123 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 RPS10P46783 165 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 FGF8P55075 233 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 CCL20P78556 96 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 TLE1Q04724 770 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 ARL16Q0P5N6 197 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 TMEM241Q24JQ0 296 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF674Q2M3X9 581 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 VWC2Q2TAL6 325 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 AARDQ4LEZ3 155 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 TEX36Q5VZQ5 186 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 HAPLN4Q86UW8 402 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 DOLPP1Q86YN1 238 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 MED12LQ86YW9 2145 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 ODF3L1Q8IXM7 274 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 FAM24BQ8N5W8 94 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 DEFB108BQ8NET1 73 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 SLC24A4Q8NFF2 622 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 OR4F5Q8NH21 305 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 VSTM2AQ8TAG5 236 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 GAFA1Q96PS6 74 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 OR4F4Q96R69 305 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 CCL13Q99616 98 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 SMIM7Q9BQ49 75 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 AGMATQ9BSE5 352 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 SCRT1Q9BWW7 348 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 SLC25A22Q9H936 323 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 TMEM242Q9NWH2 141 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 SLC25A10Q9UBX3 287 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 FOXA2Q9Y261 457 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 WDR83OSQ9Y284 106 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 PPIAL4AQ9Y536 164 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 ZZEF1O43149 2961 aa4.83□□□□□ -1.64
ATPAF1-204ENST00000474020 SAA2-SAA4A0A096LPE2 208 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 A0A1W2PPE2 198 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 MEX3AA1L020 520 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 C15orf61A6NNL5 157 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 FNDC10F2Z333 226 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 PPP1R2P9O14990 202 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 HMGB3O15347 200 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 KBTBD11O94819 623 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 CXorf1O96002 111 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 GYPAP02724 150 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 TFF1P04155 84 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms