RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 RPP14O95059 124 aaKnown RBP4.28□□□□□ -1.72
HDAC3-206ENST00000471968 YIF1AO95070 293 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 GADD45GO95257 159 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 IGKV3-20P01619 116 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 CD5P06127 495 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 EIF4EP06730 217 aaKnown RBP4.28□□□□□ -1.72
HDAC3-206ENST00000471968 MRPL3P09001 348 aaKnown RBP4.28□□□□□ -1.72
HDAC3-206ENST00000471968 AREGP15514 252 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 ARPC4P59998 168 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 WFDC2Q14508 124 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 PRR4Q16378 134 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 VMA21Q3ZAQ7 101 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 PSMG4Q5JS54 123 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 LY6G6FQ5SQ64 297 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 DEFB107AQ8IZN7 70 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 LRTM2Q8N967 370 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 OR2T33Q8NG76 320 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 OR13C9Q8NGT0 318 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 IL1F10Q8WWZ1 152 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 FGGYQ96C11 551 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 GALMQ96C23 342 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 PELI1Q96FA3 418 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 BSCL2Q96G97 398 aaPredicted RBP4.28□□□□□ -1.72
HDAC3-206ENST00000471968 GRAMD2BQ96HH9 432 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 ARPC5LQ9BPX5 153 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 CMC2Q9NRP2 79 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 CMTM6Q9NX76 183 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 IL20Q9NYY1 176 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 NDUFAF4Q9P032 175 aa4.28□□□□□ -1.72
HDAC3-206ENST00000471968 LOC107986453A0A1B0GWG9 222 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 B2RBV5 119 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 H3BMM0 161 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 APOHP02749 345 aaPredicted RBP4.27□□□□□ -1.73
HDAC3-206ENST00000471968 PRM2P04554 102 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 FABP3P05413 133 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 PTBP1P26599 531 aaKnown RBP eCLIP4.27□□□□□ -1.73
HDAC3-206ENST00000471968 RSU1Q15404 277 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 KISS1Q15726 138 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 C1orf146Q5VVC0 180 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 IQCF2Q8IXL9 164 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 C1orf158Q8N1D5 194 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 SVOPQ8N4V2 548 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 OR10H4Q8NGA5 316 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 ASB17Q8WXJ9 295 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 BORCS5Q969J3 196 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 CCDC124Q96CT7 223 aaKnown RBP4.27□□□□□ -1.73
HDAC3-206ENST00000471968 PYURFQ96I23 114 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 CLUHP3Q96NS8 147 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 NEDD4LQ96PU5 975 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 TEX12Q9BXU0 123 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 S100A14Q9HCY8 104 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 ARL8BQ9NVJ2 186 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 ARMC1Q9NVT9 282 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 TVP23BQ9NYZ1 205 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 RSL24D1Q9UHA3 163 aaKnown RBP4.27□□□□□ -1.73
HDAC3-206ENST00000471968 BAIAP2Q9UQB8 552 aa4.27□□□□□ -1.73
HDAC3-206ENST00000471968 A0A096LPF7 62 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 CCDC160A6NGH7 325 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 E7EUB6 86 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 BOLA2-SMG1P6H3BVE0 249 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 ADAP1O75689 374 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 MT-ND2P03891 347 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 IL6RP08887 468 aaPredicted RBP4.26□□□□□ -1.73
HDAC3-206ENST00000471968 HOXB6P17509 224 aaKnown RBP4.26□□□□□ -1.73
HDAC3-206ENST00000471968 NAT1P18440 290 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 EVI2AP22794 236 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 BCAP31P51572 246 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 AQP4P55087 323 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 RBM11P57052 281 aaKnown RBP4.26□□□□□ -1.73
HDAC3-206ENST00000471968 KLK9Q2XQG4 91 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 SPSB3Q6PJ21 355 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 ZNF322Q6U7Q0 402 aaPredicted RBP4.26□□□□□ -1.73
HDAC3-206ENST00000471968 CYP2R1Q6VVX0 501 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 TMED4Q7Z7H5 227 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 DHFR2Q86XF0 187 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 UBAC2Q8NBM4 344 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 CCDC54Q8NEL0 328 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 TMEM37Q8WXS4 190 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 AGMATQ9BSE5 352 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 ZNF556Q9HAH1 456 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 KLK9Q9UKQ9 250 aa4.26□□□□□ -1.73
HDAC3-206ENST00000471968 IGHV3-21A0A0B4J1V1 117 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 MCRIP1C9JLW8 97 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 M0R1X1 148 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 TNFRSF11BO00300 401 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 LECT2O14960 151 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 CREBL2O60519 120 aaPredicted RBP4.25□□□□□ -1.73
HDAC3-206ENST00000471968 CCNKO75909 580 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 CCNB2O95067 398 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 BAG2O95816 211 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 HSD17B1P14061 328 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 CAPGP40121 348 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 CXCR4P61073 352 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 ZFP1Q6P2D0 407 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 MMD2Q8IY49 270 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 PXT1Q8NFP0 134 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 OR52N1Q8NH53 320 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 GIPC3Q8TF64 312 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 TNFAIP8L1Q8WVP5 186 aa4.25□□□□□ -1.73
HDAC3-206ENST00000471968 OR10C1Q96KK4 312 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms