RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 CGB1A6NKQ9 187 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 G3V318 75 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 ACTL6BO94805 426 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 ATG12O94817 140 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 HLA-AP01891 365 aaKnown RBP8.29□□□□□ -1.08
SMC1A-206ENST00000470241 OPN1MWP04001 364 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 FGF2P09038 288 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 OPN1MW2P0DN77 364 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 OPN1MW3P0DN78 364 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 MAS1LP35410 378 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 OR2B8PP59922 312 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 SRPXP78539 464 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 ASPHD1Q5U4P2 390 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 Q6ZRM9 215 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 LYZL2Q7Z4W2 148 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 ZNF329Q86UD4 541 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 SLC35G3Q8N808 338 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 OR52B4Q8NGK2 314 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 ABHD5Q8WTS1 349 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 CHPT1Q8WUD6 406 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 LSM10Q969L4 123 aaKnown RBP8.29□□□□□ -1.08
SMC1A-206ENST00000470241 GPR146Q96CH1 333 aa8.29□□□□□ -1.08
SMC1A-206ENST00000470241 RRNAD1Q96FB5 475 aaKnown RBP8.29□□□□□ -1.08
SMC1A-206ENST00000470241 A0A0B4J2A0 478 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 TEX50A0A1B0GTY4 177 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 PSMB11A5LHX3 300 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 MSGN1A6NI15 193 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 C15orf61A6NNL5 157 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 TEX22C9J3V5 150 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 INMT-MINDY4F8WBC2 141 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 SNAPC5O75971 98 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 DUS4LO95620 317 aaKnown RBP8.28□□□□□ -1.08
SMC1A-206ENST00000470241 PTTG1O95997 202 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 IL5P05113 134 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 VDAC1P21796 283 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 PPIFP30405 207 aaKnown RBP8.28□□□□□ -1.08
SMC1A-206ENST00000470241 RPL27AP46776 148 aaKnown RBP8.28□□□□□ -1.08
SMC1A-206ENST00000470241 SRSF4Q08170 494 aaKnown RBP8.28□□□□□ -1.08
SMC1A-206ENST00000470241 ECSCRQ19T08 205 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 AKIRIN2Q53H80 203 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 NMSQ5H8A3 153 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 PLET1Q6UQ28 207 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 C12orf54Q6X4T0 127 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 CENPVQ7Z7K6 275 aaPredicted RBP8.28□□□□□ -1.08
SMC1A-206ENST00000470241 FAM219AQ8IW50 185 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 MINDY2Q8NBR6 621 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 LFNGQ8NES3 379 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 OR4A16Q8NH70 328 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 RNASE11Q8TAA1 199 aaKnown RBP8.28□□□□□ -1.08
SMC1A-206ENST00000470241 SEC22CQ9BRL7 303 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 MARVELD1Q9BSK0 173 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 TMEM14BQ9NUH8 114 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 SHPKQ9UHJ6 478 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 PRNDQ9UKY0 176 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 OR51B2Q9Y5P1 312 aa8.28□□□□□ -1.08
SMC1A-206ENST00000470241 DUXBA0A1W2PPF3 345 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 HMX3A6NHT5 357 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 SOX15O60248 233 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 APELAP0DMC3 54 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 TCTEX1D4Q5JR98 221 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 HIST2H2BDQ6DRA6 164 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 UNQ5815/PRO19632Q6UWF5 114 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 OR5AU1Q8NGC0 362 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 COQ8AQ8NI60 647 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 ZNF431Q8TF32 576 aaPredicted RBP8.27□□□□□ -1.09
SMC1A-206ENST00000470241 MITD1Q8WV92 249 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 FYTTD1Q96QD9 318 aaKnown RBP8.27□□□□□ -1.09
SMC1A-206ENST00000470241 SPIN2AQ99865 258 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 SPIN2BQ9BPZ2 258 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 ZNF747Q9BV97 191 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 QTRT1Q9BXR0 403 aaKnown RBP8.27□□□□□ -1.09
SMC1A-206ENST00000470241 GON7Q9BXV9 100 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 COMMD5Q9GZQ3 224 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 CACNG5Q9UF02 275 aa8.27□□□□□ -1.09
SMC1A-206ENST00000470241 FOXA2Q9Y261 457 aaPredicted RBP8.27□□□□□ -1.09
SMC1A-206ENST00000470241 PIGBOS1A0A0B4J2F0 54 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 A0A1W2PN81 502 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 IGLV1-40P01703 118 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 IGHG4P01861 327 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 HOXB5P09067 269 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 CD28P10747 220 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 CHRNA7P36544 502 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 HSPE1P61604 102 aaKnown RBP8.26□□□□□ -1.09
SMC1A-206ENST00000470241 SLC35B1P78383 322 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 TMEM267Q0VDI3 215 aaPredicted RBP8.26□□□□□ -1.09
SMC1A-206ENST00000470241 AARDQ4LEZ3 155 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 ZNF429Q86V71 674 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 C11orf44Q8N8P7 122 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 OR1L8Q8NGR8 309 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 OR5B3Q8NH48 314 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 TMEM68Q96MH6 324 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 PHB2Q99623 299 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 NDUFA4L2Q9NRX3 87 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 FKBP11Q9NYL4 201 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 ZNF257Q9Y2Q1 563 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 TMED3Q9Y3Q3 217 aa8.26□□□□□ -1.09
SMC1A-206ENST00000470241 IGLC7A0M8Q6 106 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 ST8SIA3O43173 380 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 RBMXL2O75526 392 aaKnown RBP8.25□□□□□ -1.09
SMC1A-206ENST00000470241 ADAP1O75689 374 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms