RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 NAA60Q9H7X0 242 aa9.83□□□□□ -0.84
HDAC4-207ENST00000461113 ZNF430Q9H8G1 570 aaPredicted RBP9.83□□□□□ -0.84
HDAC4-207ENST00000461113 TPSG1Q9NRR2 321 aa9.83□□□□□ -0.84
HDAC4-207ENST00000461113 ZFP57Q9NU63 452 aa9.83□□□□□ -0.84
HDAC4-207ENST00000461113 TMEM140Q9NV12 185 aa9.83□□□□□ -0.84
HDAC4-207ENST00000461113 FOXA2Q9Y261 457 aaPredicted RBP9.83□□□□□ -0.84
HDAC4-207ENST00000461113 TSSC4Q9Y5U2 329 aaPredicted RBP9.83□□□□□ -0.84
HDAC4-207ENST00000461113 CRYM-AS1A6NIL9 109 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 CD28P10747 220 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 IGLL1P15814 213 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 HLA-GP17693 338 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 G6PCP35575 357 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 RPL27AP46776 148 aaKnown RBP9.82□□□□□ -0.84
HDAC4-207ENST00000461113 RAB25P57735 213 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 BRWD1-AS2P59051 145 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 SRPXP78539 464 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 PJVKQ0ZLH3 352 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 NDUFA11Q86Y39 141 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 ZNF695Q8IW36 515 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 MRPL41Q8IXM3 137 aaKnown RBP9.82□□□□□ -0.84
HDAC4-207ENST00000461113 CADM3Q8N126 398 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 LFNGQ8NES3 379 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 OR5M8Q8NGP6 311 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 OR4A16Q8NH70 328 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 SDHCQ99643 169 aaPredicted RBP9.82□□□□□ -0.84
HDAC4-207ENST00000461113 ZNF355PQ9NSJ1 428 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 GAR1Q9NY12 217 aaKnown RBP9.82□□□□□ -0.84
HDAC4-207ENST00000461113 PRNDQ9UKY0 176 aa9.82□□□□□ -0.84
HDAC4-207ENST00000461113 A0A1W2PN81 502 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 MSGN1A6NI15 193 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 NUDT19A8MXV4 375 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 G3V318 75 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 UPK2O00526 184 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 LYRM1O43325 122 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 IGHG4P01861 327 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 FGF2P09038 288 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 OR5AC1P0C628 307 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 PF4V1P10720 104 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 CHRNA7P36544 502 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 CRIP2P52943 208 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-207ENST00000461113 DEFA1P59665 94 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 DEFA3P59666 94 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 SP6Q3SY56 376 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 ZNF585BQ52M93 769 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 TMEM128Q5BJH2 165 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 CENPSQ8N2Z9 138 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 OR4F17Q8NGA8 305 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 SRSF12Q8WXF0 261 aaKnown RBP9.81□□□□□ -0.84
HDAC4-207ENST00000461113 FYTTD1Q96QD9 318 aaKnown RBP9.81□□□□□ -0.84
HDAC4-207ENST00000461113 OR4F4Q96R69 305 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 TP53RKQ96S44 253 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 CITED2Q99967 270 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-207ENST00000461113 FAM103A1Q9BTL3 118 aaKnown RBP9.81□□□□□ -0.84
HDAC4-207ENST00000461113 VSIG4Q9Y279 399 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 NUBP2Q9Y5Y2 271 aa9.81□□□□□ -0.84
HDAC4-207ENST00000461113 ARPC1BO15143 372 aaKnown RBP9.8□□□□□ -0.84
HDAC4-207ENST00000461113 CYB5BO43169 146 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 NDUFB6O95139 128 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 DHFRP00374 187 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 VAMP1P23763 118 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 UCP1P25874 307 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 SLC6A1P30531 599 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 CCR6P51684 374 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 UBE2MP61081 183 aaKnown RBP9.8□□□□□ -0.84
HDAC4-207ENST00000461113 NDPQ00604 133 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 CD83Q01151 205 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 THOC7Q6I9Y2 204 aaKnown RBP9.8□□□□□ -0.84
HDAC4-207ENST00000461113 FAM219AQ8IW50 185 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 OR1L8Q8NGR8 309 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 MRGPRFQ96AM1 343 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 PDCD10Q9BUL8 212 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 TMEM222Q9H0R3 208 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 CACFD1Q9UGQ2 172 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 SACSQ9NZJ4 4579 aa9.8□□□□□ -0.84
HDAC4-207ENST00000461113 FAM240BA0A1B0GVZ2 78 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 A0A1W2PRX2 142 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 H3BUA1 57 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 UPK1BO75841 260 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 TRAPPC2P0DI81 140 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 TRAPPC2BP0DI82 140 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 KRTAP10-11P60412 298 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 HSD17B13Q7Z5P4 300 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-207ENST00000461113 LGI3Q8N145 548 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 MINDY2Q8NBR6 621 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 ADAD2Q8NCV1 583 aaKnown RBP9.79□□□□□ -0.84
HDAC4-207ENST00000461113 OR5T1Q8NG75 326 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 WIPF2Q8TF74 440 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-207ENST00000461113 RBPMSQ93062 196 aaKnown RBP9.79□□□□□ -0.84
HDAC4-207ENST00000461113 IL22RA2Q969J5 263 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 GALNT14Q96FL9 552 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 TMEM56Q96MV1 263 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 SRSF8Q9BRL6 282 aaKnown RBP9.79□□□□□ -0.84
HDAC4-207ENST00000461113 HINT2Q9BX68 163 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 SLA2Q9H6Q3 261 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 COA4Q9NYJ1 87 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 OR51B2Q9Y5P1 312 aa9.79□□□□□ -0.84
HDAC4-207ENST00000461113 CDS2O95674 445 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 OR9G9P0C7N8 305 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 EGR2P11161 476 aaPredicted RBP9.78□□□□□ -0.84
HDAC4-207ENST00000461113 DEFA4P12838 97 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms