RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ELK1P19419 428 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 HLA-DMAP28067 261 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 RORCP51449 518 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 CTF1Q16619 201 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 KLK9Q2XQG4 91 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 FAM209BQ5JX69 171 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 CTRB2Q6GPI1 263 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 SNX29P2Q8IUI4 249 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 SBSPONQ8IVN8 264 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 OR6F1Q8NGZ6 308 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 TMEM140Q9NV12 185 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 KLK9Q9UKQ9 250 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 DMRT1Q9Y5R6 373 aa14.4□□□□□ -0.1
COL5A1-203ENST00000460264 IGLC7A0M8Q6 106 aa14.39□□□□□ -0.11
COL5A1-203ENST00000460264 PPP5D1E7EU14 171 aa14.39□□□□□ -0.11
COL5A1-203ENST00000460264 PGLYRP1O75594 196 aaPredicted RBP14.39□□□□□ -0.11
COL5A1-203ENST00000460264 NDUFB8O95169 186 aa14.39□□□□□ -0.11
COL5A1-203ENST00000460264 DHFRP00374 187 aa14.39□□□□□ -0.11
COL5A1-203ENST00000460264 FGF2P09038 288 aa14.39□□□□□ -0.11
COL5A1-203ENST00000460264 Q8N1Y9 231 aa14.39□□□□□ -0.11
COL5A1-203ENST00000460264 DMBX1Q8NFW5 382 aa14.39□□□□□ -0.11
COL5A1-203ENST00000460264 CCDC140Q96MF4 163 aa14.39□□□□□ -0.11
COL5A1-203ENST00000460264 PEMTQ9UBM1 199 aa14.39□□□□□ -0.11
COL5A1-203ENST00000460264 H0Y980 276 aa14.38□□□□□ -0.11
COL5A1-203ENST00000460264 GPR31O00270 319 aa14.38□□□□□ -0.11
COL5A1-203ENST00000460264 RPA2P15927 270 aa14.38□□□□□ -0.11
COL5A1-203ENST00000460264 F2RP25116 425 aa14.38□□□□□ -0.11
COL5A1-203ENST00000460264 RCVRNP35243 200 aa14.38□□□□□ -0.11
COL5A1-203ENST00000460264 CMTM1Q8IZ96 169 aa14.38□□□□□ -0.11
COL5A1-203ENST00000460264 COMMD5Q9GZQ3 224 aa14.38□□□□□ -0.11
COL5A1-203ENST00000460264 IGLV11-55A0A075B6I3 123 aa14.37□□□□□ -0.11
COL5A1-203ENST00000460264 MARCH11A6NNE9 402 aa14.37□□□□□ -0.11
COL5A1-203ENST00000460264 DEFA4P12838 97 aa14.37□□□□□ -0.11
COL5A1-203ENST00000460264 HIST1H1BP16401 226 aaKnown RBP14.37□□□□□ -0.11
COL5A1-203ENST00000460264 ERVK-16P61578 105 aa14.37□□□□□ -0.11
COL5A1-203ENST00000460264 GPR107Q5VW38 600 aa14.37□□□□□ -0.11
COL5A1-203ENST00000460264 LCN12Q6JVE5 192 aa14.37□□□□□ -0.11
COL5A1-203ENST00000460264 FCAMRQ8WWV6 532 aa14.37□□□□□ -0.11
COL5A1-203ENST00000460264 DGCR14Q96DF8 476 aaKnown RBP14.37□□□□□ -0.11
COL5A1-203ENST00000460264 S4R3C0 116 aa14.37□□□□□ -0.11
COL5A1-203ENST00000460264 NBEAL2Q6ZNJ1 2754 aa14.37□□□□□ -0.11
COL5A1-203ENST00000460264 GGCTO75223 188 aaKnown RBP14.36□□□□□ -0.11
COL5A1-203ENST00000460264 IGHV3-23P01764 117 aa14.36□□□□□ -0.11
COL5A1-203ENST00000460264 HLA-AP01891 365 aaKnown RBP14.36□□□□□ -0.11
COL5A1-203ENST00000460264 IGHV4-30-4P0DP06 118 aa14.36□□□□□ -0.11
COL5A1-203ENST00000460264 MECP2P51608 486 aaKnown RBP14.36□□□□□ -0.11
COL5A1-203ENST00000460264 TSPAN5P62079 268 aa14.36□□□□□ -0.11
COL5A1-203ENST00000460264 ZNF585BQ52M93 769 aa14.36□□□□□ -0.11
COL5A1-203ENST00000460264 MZT2AQ6P582 158 aa14.36□□□□□ -0.11
COL5A1-203ENST00000460264 ADAMTSL5Q6ZMM2 481 aa14.36□□□□□ -0.11
COL5A1-203ENST00000460264 Q8N402 240 aa14.36□□□□□ -0.11
COL5A1-203ENST00000460264 AP3S1Q92572 193 aa14.36□□□□□ -0.11
COL5A1-203ENST00000460264 SRSF8Q9BRL6 282 aaKnown RBP14.36□□□□□ -0.11
COL5A1-203ENST00000460264 THAP7Q9BT49 309 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-203ENST00000460264 QTRT1Q9BXR0 403 aaKnown RBP14.36□□□□□ -0.11
COL5A1-203ENST00000460264 IZUMO1RA6ND01 250 aa14.35□□□□□ -0.11
COL5A1-203ENST00000460264 FAM25AB3EWG3 89 aa14.35□□□□□ -0.11
COL5A1-203ENST00000460264 FAM25CB3EWG5 89 aa14.35□□□□□ -0.11
COL5A1-203ENST00000460264 FAM25GB3EWG6 89 aa14.35□□□□□ -0.11
COL5A1-203ENST00000460264 LPAR6P43657 344 aa14.35□□□□□ -0.11
COL5A1-203ENST00000460264 PHLDA2Q53GA4 152 aa14.35□□□□□ -0.11
COL5A1-203ENST00000460264 CLEC19AQ6UXS0 136 aa14.35□□□□□ -0.11
COL5A1-203ENST00000460264 SGPP2Q8IWX5 399 aa14.35□□□□□ -0.11
COL5A1-203ENST00000460264 OR10W1Q8NGF6 305 aa14.35□□□□□ -0.11
COL5A1-203ENST00000460264 EEF1AKMT3Q96AZ1 226 aa14.35□□□□□ -0.11
COL5A1-203ENST00000460264 MRPS26Q9BYN8 205 aaKnown RBP14.35□□□□□ -0.11
COL5A1-203ENST00000460264 MFSD2BA6NFX1 497 aa14.34□□□□□ -0.11
COL5A1-203ENST00000460264 A8MZ25 164 aa14.34□□□□□ -0.11
COL5A1-203ENST00000460264 OR2C1O95371 312 aa14.34□□□□□ -0.11
COL5A1-203ENST00000460264 KRASP01116 189 aa14.34□□□□□ -0.11
COL5A1-203ENST00000460264 ZNF182P17025 639 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-203ENST00000460264 ARL3P36405 182 aa14.34□□□□□ -0.11
COL5A1-203ENST00000460264 THOC7Q6I9Y2 204 aaKnown RBP14.34□□□□□ -0.11
COL5A1-203ENST00000460264 CADM3Q8N126 398 aa14.34□□□□□ -0.11
COL5A1-203ENST00000460264 OR2K2Q8NGT1 345 aa14.34□□□□□ -0.11
COL5A1-203ENST00000460264 RCHY1Q96PM5 261 aa14.34□□□□□ -0.11
COL5A1-203ENST00000460264 C19orf73Q9NVV2 129 aa14.34□□□□□ -0.11
COL5A1-203ENST00000460264 TRBV7-1A0A0A6YYK4 115 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 C2orf70A6NJV1 201 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 LGALS9O00182 355 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 EDN2P20800 178 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 S100GP29377 79 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 G6PCP35575 357 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 ALDH3B2P48448 385 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 RNASE12Q5GAN4 147 aaKnown RBP14.33□□□□□ -0.12
COL5A1-203ENST00000460264 LPCAT3Q6P1A2 487 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 GPHB5Q86YW7 130 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 GDPD1Q8N9F7 314 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 OR1L8Q8NGR8 309 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 CXorf58Q96LI9 332 aa14.33□□□□□ -0.12
COL5A1-203ENST00000460264 FAM212BQ9NTI7 297 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-203ENST00000460264 TEX50A0A1B0GTY4 177 aa14.32□□□□□ -0.12
COL5A1-203ENST00000460264 M0QYG6 137 aa14.32□□□□□ -0.12
COL5A1-203ENST00000460264 TRAPPC2P0DI81 140 aa14.32□□□□□ -0.12
COL5A1-203ENST00000460264 TRAPPC2BP0DI82 140 aa14.32□□□□□ -0.12
COL5A1-203ENST00000460264 UCP3P55916 312 aa14.32□□□□□ -0.12
COL5A1-203ENST00000460264 WT1-ASQ06250 92 aa14.32□□□□□ -0.12
COL5A1-203ENST00000460264 CD300EQ496F6 205 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-203ENST00000460264 HSD17B13Q7Z5P4 300 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-203ENST00000460264 TBC1D26Q86UD7 250 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms