RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 EXOC3-AS1Q8N2X6 119 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 PDCL2Q8N4E4 241 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 TMEM251Q8N6I4 163 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 RNASEH2CQ8TDP1 164 aaKnown RBP-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 IFT81Q8WYA0 676 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 CIDECQ96AQ7 238 aaPredicted RBP-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 PPCDCQ96CD2 204 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 LRRC45Q96CN5 670 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 TLCD1Q96CP7 247 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 CMTM5Q96DZ9 223 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 PRRT1Q99946 306 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 TMEM208Q9BTX3 173 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 BBS2Q9BXC9 721 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 MROQ9BYG7 248 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 CXorf21Q9HAI6 301 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 HRASLSQ9HDD0 168 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 MRM2Q9UI43 246 aaKnown RBP-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 PRELID1Q9Y255 219 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 NUP160Q12769 1436 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 MAST2Q6P0Q8 1798 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 DICER1Q9UPY3 1922 aaKnown RBP-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 KMT2CQ8NEZ4 4911 aaKnown RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 TPRP12270 2363 aaKnown RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 MED12Q93074 2177 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 TRAV8-1A0A0A6YYK1 113 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 TRAV3A0A0B4J244 114 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 NUPR2A6NF83 97 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 CCDC160A6NGH7 325 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 METTL15A6NJ78 407 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 GOLGA8RI6L899 631 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 SULT1C2O00338 296 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 COPEO14579 308 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 OR1I1O60431 355 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 OR5F1O95221 314 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 TNFAIP8O95379 198 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 LDOC1O95751 146 aaPredicted RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 IGHV3-7P01780 117 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 KRT7P08729 469 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 PTNP21246 168 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 RPS4Y1P22090 263 aaKnown RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 LCN1P31025 176 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 SPINT3P49223 89 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 ZNF137PP52743 207 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 DLX6P56179 175 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 H2BFSP57053 126 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 SNAP25P60880 206 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 FKBP1AP62942 108 aaKnown RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 BTN3A2P78410 334 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 HLA-DRB3P79483 266 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 PSG9Q00887 426 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 FLOT2Q14254 428 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 OR4D1Q15615 310 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 C18orf21Q32NC0 220 aaPredicted RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 RNASE10Q5GAN6 216 aaKnown RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 TEX261Q6UWH6 196 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 SOSTDC1Q6X4U4 206 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 ZNF826PQ6ZT77 177 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 AAED1Q7RTV5 226 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 MRPL52Q86TS9 123 aaKnown RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 OOSP2Q86WS3 158 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 ACBD4Q8NC06 268 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 WFDC11Q8NEX6 87 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 OR2T27Q8NH04 317 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 ANKRD7Q92527 254 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 RORBQ92753 470 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 MS4A6EQ96DS6 147 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 GNPNAT1Q96EK6 184 aaPredicted RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 CCL13Q99616 98 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 BCL7BQ9BQE9 202 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 NSRP1Q9H0G5 558 aaKnown RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 ACER3Q9NUN7 267 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 PARVAQ9NVD7 372 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 PAQR5Q9NXK6 330 aaPredicted RBP-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 COMMD9Q9P000 198 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 PSME2Q9UL46 239 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 ANAPC10Q9UM13 185 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 U3KQ87 197 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 DOCK3Q8IZD9 2030 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 KIAA0232Q92628 1395 aa-0.33□□□□□ -2.46
SNHG3-203ENST00000447507 HIVEP3Q5T1R4 2406 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 NUP153P49790 1475 aaKnown RBP-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 GSTTP1A0A1W2PQM5 241 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 RAB19A4D1S5 217 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 SMIM9A6NGZ8 99 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 GOLGA6L10A6NI86 522 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 ZNF736B4DX44 427 aaPredicted RBP-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 CLDN25C9JDP6 229 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 F5H5K5 113 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 H0YIV9 168 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 LST1O00453 97 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 NOS1APO75052 506 aaPredicted RBP-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 LYZL6O75951 148 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 APOMO95445 188 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 ZNF682O95780 498 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 CST4P01036 141 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 CSTAP01040 98 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 REG1AP05451 166 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 SLC35E2BP0CK96 405 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 RD3LP0DJH9 198 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms