RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 SOSTQ9BQB4 213 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 TSSK6Q9BXA6 273 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 TMEM59Q9BXS4 323 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 ZNF436Q9C0F3 470 aaPredicted RBP4.53□□□□□ -1.68
RFC3-202ENST00000434425 POLR2J2Q9GZM3 115 aaKnown RBP4.53□□□□□ -1.68
RFC3-202ENST00000434425 AICDAQ9GZX7 198 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 HEXA-AS1Q9H8Q6 139 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 ISG20L2Q9H9L3 353 aaKnown RBP4.53□□□□□ -1.68
RFC3-202ENST00000434425 TAC3Q9UHF0 121 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 VDAC3Q9Y277 283 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 CSAG2Q9Y5P2 127 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 SPIN1Q9Y657 262 aaPredicted RBP4.53□□□□□ -1.68
RFC3-202ENST00000434425 ACANP16112 2415 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 DNHD1Q96M86 4753 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 GTF3C1Q12789 2109 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 IGKV1-8A0A0C4DH67 115 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 IFITM10A6NMD0 228 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 COLCA2A8K830 154 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 M0R129 80 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 PHOX2AO14813 284 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 SPRY3O43610 288 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 KLF7O75840 302 aaPredicted RBP4.52□□□□□ -1.69
RFC3-202ENST00000434425 IGHG2P01859 326 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 OR12D1P0DN82 309 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 ACP2P11117 423 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 BCL3P20749 454 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 ATP6V0CP27449 155 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 GNG4P50150 75 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 POLR2HP52434 150 aaKnown RBP4.52□□□□□ -1.69
RFC3-202ENST00000434425 TAS2R20P59543 309 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 SUMO2P61956 95 aaKnown RBP4.52□□□□□ -1.69
RFC3-202ENST00000434425 RPL24P83731 157 aaKnown RBP4.52□□□□□ -1.69
RFC3-202ENST00000434425 MEF2CQ06413 473 aaPredicted RBP4.52□□□□□ -1.69
RFC3-202ENST00000434425 FAM27E3Q08E93 113 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 FUT5Q11128 374 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 FOXF2Q12947 444 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 C1DQ13901 141 aaKnown RBP4.52□□□□□ -1.69
RFC3-202ENST00000434425 LAGE3Q14657 143 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 CEACAM16Q2WEN9 425 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 C1orf189Q5VU69 101 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 SLC48A1Q6P1K1 146 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 IGFL2Q6UWQ7 119 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 ZNF793Q6ZN11 406 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 Q6ZS92 163 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 Q6ZTK2 550 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 OOSP2Q86WS3 158 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 TCEANCQ8N8B7 351 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 ZNF615Q8N8J6 731 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 TEX45Q8NA69 505 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 TMEM178AQ8NBL3 297 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 OR1S1Q8NH92 325 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 OR1L3Q8NH93 324 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 ZNF519Q8TB69 540 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 SLC25A46Q96AG3 418 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 PLEKHB2Q96CS7 222 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 MS4A6EQ96DS6 147 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 TSPAN32Q96QS1 320 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 WFDC6Q9BQY6 131 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 SMIM3Q9BZL3 60 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 PRTFDC1Q9NRG1 225 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 V9GYH0 126 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 CACNA1CQ13936 2221 aa4.52□□□□□ -1.69
RFC3-202ENST00000434425 TRDV1A0A1B0GX56 115 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 TLCD2A6NGC4 264 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 LYRM9A8MSI8 78 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 F5H697 171 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 TMEM178BH3BS89 294 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 RHODO00212 210 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 MYL12BO14950 172 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 SPINT2O43291 252 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 TRIAP1O43715 76 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 LALBAP00709 142 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 HLA-DQB1P01920 261 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 REG1AP05451 166 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 TFPIP10646 304 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 COX5AP20674 150 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 SSR2P43308 183 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 NCBP2P52298 156 aaKnown RBP eCLIP4.51□□□□□ -1.693e-8■□□□□ 9
RFC3-202ENST00000434425 EMP1P54849 157 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 CTBP2P56545 445 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 HOXC5Q00444 222 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 HSD52Q0P140 79 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 ZNF79Q15937 498 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 C10orf91Q5T1B1 145 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 FER1L6-AS1Q8NA97 138 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 OR4F17Q8NGA8 305 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 OR4C3Q8NH37 302 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 ZNF502Q8TBZ5 544 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 NT5CQ8TCD5 201 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 CNRIP1Q96F85 164 aaPredicted RBP4.51□□□□□ -1.69
RFC3-202ENST00000434425 OR4F4Q96R69 305 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 KIR2DL4Q99706 377 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 MACROD1Q9BQ69 325 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 RTBDNQ9BSG5 229 aaPredicted RBP4.51□□□□□ -1.69
RFC3-202ENST00000434425 TMEM222Q9H0R3 208 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 TXNL4BQ9NX01 149 aaKnown RBP4.51□□□□□ -1.69
RFC3-202ENST00000434425 TVP23BQ9NYZ1 205 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 DNAJC27Q9NZQ0 273 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 HEBP2Q9Y5Z4 205 aa4.51□□□□□ -1.69
RFC3-202ENST00000434425 PRR32B1ATL7 298 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms