RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 TRAV18A0A075B6X5 111 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 RBMY1BA6NDE4 496 aaKnown RBP13.35□□□□□ -0.27
GPC1-203ENST00000425056 RBMY1EA6NEQ0 496 aaKnown RBP13.35□□□□□ -0.27
GPC1-203ENST00000425056 CGB1A6NKQ9 187 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 IGHV3-23P01764 117 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 RBMY1DP0C7P1 496 aaKnown RBP13.35□□□□□ -0.27
GPC1-203ENST00000425056 PTHLHP12272 177 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 HIST1H1BP16401 226 aaKnown RBP13.35□□□□□ -0.27
GPC1-203ENST00000425056 HLA-GP17693 338 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 OR4A47Q6IF82 309 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 CLEC19AQ6UXS0 136 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 SPAG16Q8N0X2 631 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 DEFB125Q8N687 156 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 EEF1AKMT3Q96AZ1 226 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 WDR89Q96FK6 387 aaPredicted RBP13.35□□□□□ -0.27
GPC1-203ENST00000425056 AIFM2Q9BRQ8 373 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 RNF167Q9H6Y7 350 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 SRD5A3Q9H8P0 318 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 S4R3C0 116 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 TMEM213A2RRL7 107 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 OR11H12B2RN74 326 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 MYOD1P15172 320 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 CBLN1P23435 193 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 TAS2R31P59538 309 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 CATR1Q13166 79 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 POU2AF1Q16633 256 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 GUCA2BQ16661 112 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 IDNKQ5T6J7 187 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 CACNG8Q8WXS5 425 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 FAM110AQ9BQ89 295 aa13.34□□□□□ -0.27
GPC1-203ENST00000425056 TRBV7-1A0A0A6YYK4 115 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 LOC100506127A0A0U1RQW1 187 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 REG1AP05451 166 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 FGF2P09038 288 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 SMIM18P0DKX4 95 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 OR2B8PP59922 312 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 NEDD8Q15843 81 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 FAM106AQ4KMX7 169 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 TMEM61Q8N0U2 210 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 CXorf58Q96LI9 332 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 SLC5A7Q9GZV3 580 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 AUNIPQ9H7T9 357 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 HRASLSQ9HDD0 168 aa13.33□□□□□ -0.28
GPC1-203ENST00000425056 IGLC7A0M8Q6 106 aa13.32□□□□□ -0.28
GPC1-203ENST00000425056 MFSD2BA6NFX1 497 aa13.32□□□□□ -0.28
GPC1-203ENST00000425056 SULT1C2O00338 296 aa13.32□□□□□ -0.28
GPC1-203ENST00000425056 HPRT1P00492 218 aa13.32□□□□□ -0.28
GPC1-203ENST00000425056 DEFA4P12838 97 aa13.32□□□□□ -0.28
GPC1-203ENST00000425056 CBX5P45973 191 aa13.32□□□□□ -0.28
GPC1-203ENST00000425056 SLC16A13Q7RTY0 426 aa13.32□□□□□ -0.28
GPC1-203ENST00000425056 SRSF8Q9BRL6 282 aaKnown RBP13.32□□□□□ -0.28
GPC1-203ENST00000425056 DIABLOQ9NR28 239 aa13.32□□□□□ -0.28
GPC1-203ENST00000425056 MLXQ9UH92 298 aa13.32□□□□□ -0.28
GPC1-203ENST00000425056 UPK2O00526 184 aa13.31□□□□□ -0.28
GPC1-203ENST00000425056 TMEM127O75204 238 aa13.31□□□□□ -0.28
GPC1-203ENST00000425056 NQO2P16083 231 aa13.31□□□□□ -0.28
GPC1-203ENST00000425056 FXYD4P59646 89 aa13.31□□□□□ -0.28
GPC1-203ENST00000425056 ZNF57Q68EA5 555 aaPredicted RBP13.31□□□□□ -0.28
GPC1-203ENST00000425056 ZNF818PQ6ZRF7 136 aa13.31□□□□□ -0.28
GPC1-203ENST00000425056 OR5AP2Q8NGF4 316 aa13.31□□□□□ -0.28
GPC1-203ENST00000425056 IL17DQ8TAD2 202 aa13.31□□□□□ -0.28
GPC1-203ENST00000425056 GIMAP1Q8WWP7 306 aa13.31□□□□□ -0.28
GPC1-203ENST00000425056 PLEKHA2Q9HB19 425 aa13.31□□□□□ -0.28
GPC1-203ENST00000425056 TRAV3A0A0B4J244 114 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 ZNF320A2RRD8 509 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 FCER2P06734 321 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 TMEM17Q86X19 198 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 UXS1Q8NBZ7 420 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 OR51H1Q8NH63 302 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 ZNF502Q8TBZ5 544 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 CD300LFQ8TDQ1 290 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 COMMD5Q9GZQ3 224 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 TMEM140Q9NV12 185 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 COMMD9Q9P000 198 aa13.3□□□□□ -0.28
GPC1-203ENST00000425056 S1PR2O95136 353 aa13.29□□□□□ -0.28
GPC1-203ENST00000425056 CLEC3BP05452 202 aa13.29□□□□□ -0.28
GPC1-203ENST00000425056 GPR183P32249 361 aa13.29□□□□□ -0.28
GPC1-203ENST00000425056 AADACL3Q5VUY0 350 aa13.29□□□□□ -0.28
GPC1-203ENST00000425056 THOC7Q6I9Y2 204 aaKnown RBP13.29□□□□□ -0.28
GPC1-203ENST00000425056 BTNL8Q6UX41 500 aa13.29□□□□□ -0.28
GPC1-203ENST00000425056 UNQ9165/PRO28630Q6UXU0 137 aa13.29□□□□□ -0.28
GPC1-203ENST00000425056 BORCS5Q969J3 196 aa13.29□□□□□ -0.28
GPC1-203ENST00000425056 MARC2Q969Z3 335 aa13.29□□□□□ -0.28
GPC1-203ENST00000425056 QTRT1Q9BXR0 403 aaKnown RBP13.29□□□□□ -0.28
GPC1-203ENST00000425056 SELENOKQ9Y6D0 94 aa13.29□□□□□ -0.28
GPC1-203ENST00000425056 XRCC3O43542 346 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 C8orf88P0DMB2 117 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 GNRHRP30968 328 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 HERV-K104P61576 105 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 TM4SF20Q53R12 229 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 GDPD1Q8N9F7 314 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 DMBX1Q8NFW5 382 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 OR52B4Q8NGK2 314 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 IFT46Q9NQC8 304 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 THYN1Q9P016 225 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 ANAPC10Q9UM13 185 aa13.28□□□□□ -0.28
GPC1-203ENST00000425056 EPPK1P58107 5090 aaKnown RBP13.27□□□□□ -0.28
GPC1-203ENST00000425056 TRAV25A0A0B4J276 109 aa13.27□□□□□ -0.29
GPC1-203ENST00000425056 MEIS3P1A6NDR6 274 aa13.27□□□□□ -0.29
GPC1-203ENST00000425056 SCAF4O95104 1147 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms