RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 LINC00315P59091 139 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 GK3PQ14409 553 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 AWAT2Q6E213 333 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 GLIPR1L1Q6UWM5 242 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 GAPTQ8N292 157 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 JAGN1Q8N5M9 183 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 STXBP6Q8NFX7 210 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 OR5AK2Q8NH90 309 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 BSCL2Q96G97 398 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-203ENST00000424270 MRPL48Q96GC5 212 aaKnown RBP4.42□□□□□ -1.7
SDCBP-203ENST00000424270 FANCD2OSQ96PS1 177 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 C7orf50Q9BRJ6 194 aaKnown RBP4.42□□□□□ -1.7
SDCBP-203ENST00000424270 AGMATQ9BSE5 352 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 KRTAP1-5Q9BYS1 174 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 Q9H3A6 140 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 RIBC2Q9H4K1 309 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 TMBIM4Q9HC24 238 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 Q9N2K0 584 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 TMEM138Q9NPI0 162 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 MED4Q9NPJ6 270 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 DKK2Q9UBU2 259 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 IGLV5-52A0A0A0MRZ9 124 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 IGHV3-21A0A0B4J1V1 117 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 TMEM212A6NML5 194 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 OR4C45A6NMZ5 311 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 TEX22C9J3V5 150 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 ITGB1BP1O14713 200 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 SLC16A6O15403 523 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 P0C879 139 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 DNAH10OSP0CZ25 163 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 MGMTP16455 207 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 PRKACGP22612 351 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 PTBP1P26599 531 aaKnown RBP eCLIP4.41□□□□□ -1.7
SDCBP-203ENST00000424270 RELQ04864 619 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-203ENST00000424270 HSP90B2PQ58FF3 399 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 OR2B11Q5JQS5 317 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 SPSB3Q6PJ21 355 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 MOB1BQ7L9L4 216 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 FAM24BQ8N5W8 94 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-203ENST00000424270 DUSP18Q8NEJ0 188 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 OSR1Q8TAX0 266 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-203ENST00000424270 MUL1Q969V5 352 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 C4orf36Q96KX1 117 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 UHRF2Q96PU4 802 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 ZNF184Q99676 751 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-203ENST00000424270 TMEM70Q9BUB7 260 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 MAGT1Q9H0U3 335 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 RIMS4Q9H426 269 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-203ENST00000424270 CKLFQ9UBR5 152 aa4.41□□□□□ -1.7
SDCBP-203ENST00000424270 YTHDF2Q9Y5A9 579 aaKnown RBP4.41□□□□□ -1.7
SDCBP-203ENST00000424270 IGLV11-55A0A075B6I3 123 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 LOC102723971A0A1B0GUV8 181 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 SMIM9A6NGZ8 99 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 HBE1P02100 147 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 DEFB130BP0DP73 79 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 DEFB130AP0DP74 79 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 HSD17B1P14061 328 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 FGF9P31371 208 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-203ENST00000424270 ZNF85Q03923 595 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 ODF1Q14990 250 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 OXA1LQ15070 435 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 TMEM69Q5SWH9 247 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 OR2G6Q5TZ20 316 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 AADACL4Q5VUY2 407 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 SLC25A24Q6NUK1 477 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 HS3ST5Q8IZT8 346 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 VKORC1L1Q8N0U8 176 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 CSNK1G2-AS1Q8NCQ2 148 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 VSTM2AQ8TAG5 236 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 RFKQ969G6 155 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 CMTM5Q96DZ9 223 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 ADTRPQ96IZ2 230 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 PDCD1LG2Q9BQ51 273 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 GINS3Q9BRX5 216 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 FAAP24Q9BTP7 215 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 OR51E2Q9H255 320 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 MAGIXQ9H6Y5 334 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 SDHAF2Q9NX18 166 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 RDH8Q9NYR8 311 aa4.4□□□□□ -1.71
SDCBP-203ENST00000424270 BET1O15155 118 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 FCGR3BO75015 233 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 GAS8-AS1O95177 125 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 IGKV3-20P01619 116 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 CRYGCP07315 174 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 IL6RP08887 468 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-203ENST00000424270 FXYD7P58549 80 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 HLA-DRB3P79483 266 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 PSMG4Q5JS54 123 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 C6orf201Q7Z4U5 140 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 VN1R17PQ8TDU5 208 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 ST8SIA2Q92186 375 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 PTX4Q96A99 478 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 CYYR1Q96J86 154 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 Q96MT0 163 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 OR14A2Q96R54 314 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 TMEM208Q9BTX3 173 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 TMEM231Q9H6L2 316 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 C21orf62Q9NYP8 219 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 MRPS7Q9Y2R9 242 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms