RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MPTX1A8MV57 137 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 G3V3Q6 166 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 K7EPK0 472 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 TOR1AO14656 332 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 ITGB1BP1O14713 200 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 RAB29O14966 203 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 ST8SIA3O43173 380 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 BCL2L11O43521 198 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 SSSCA1O60232 199 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 FCGR3BO75015 233 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 LY6HO94772 140 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR2F2O95006 317 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 FSTL3O95633 263 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 IFNA7P01567 189 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 IGHV3-7P01780 117 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 APOA2P02652 100 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 WNT2P09544 360 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 DANCRP0C864 163 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 SLC25A4P12235 298 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 VDAC1P21796 283 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 COL8A2P25067 703 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 IL3RAP26951 378 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 S100A11P31949 105 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 LPAR6P43657 344 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 NKX2-1P43699 371 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 EFNA4P52798 201 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 MRPS11P82912 194 aaKnown RBP3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR2F1Q13607 317 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF345Q14585 488 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 C17orf58Q2M2W7 97 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMEM155Q4W5P6 130 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 Q5BKY6 102 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 FAM53AQ6NSI3 398 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 ACOT7LQ6ZUV0 252 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMUB2Q71RG4 321 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF767PQ75MW2 155 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 H2BFWTQ7Z2G1 175 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 LYZL2Q7Z4W2 148 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 SELENOHQ8IZQ5 122 aaKnown RBP3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 SPAG16Q8N0X2 631 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 FAM71E2Q8N5Q1 922 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 TCTEX1D1Q8N7M0 179 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR11H4Q8NGC9 324 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR8H1Q8NGG4 311 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR52M1Q8NGK5 317 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR10X1Q8NGY0 326 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR4S2Q8NH73 311 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 LHFPL5Q8TAF8 219 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 CD300LFQ8TDQ1 290 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 GLYATL2Q8WU03 294 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 CORO2AQ92828 525 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 LEAP2Q969E1 77 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 ADTRPQ96IZ2 230 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMEM56Q96MV1 263 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 CLCC1Q96S66 551 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 S1PR3Q99500 378 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 TOLLIPQ9H0E2 274 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 SDHAF2Q9NX18 166 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 ONECUT1Q9UBC0 465 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 KAAG1Q9UBP8 84 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 PRELID3BQ9Y3B1 194 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 AMMECR1Q9Y4X0 333 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 POMT1Q9Y6A1 747 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 SESN1Q9Y6P5 492 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMEM56-RWDD3S4R434 201 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 KIAA2026Q5HYC2 2103 aa3.05□□□□□ -1.92
HMGB3P20-201ENST00000417997 DCHS1Q96JQ0 3298 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 SPTBN2O15020 2390 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 A0A0C4DFX4 3053 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 ARFGEF3Q5TH69 2177 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 ANKRD11Q6UB99 2663 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 PPIAL4CA0A0B4J2A2 164 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 A0A1W2PPE3 182 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 A0A1W2PPR1 153 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 E5RGE8 158 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 H7C2Y5 167 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 SLC31A2O15432 143 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 ENSAO43768 121 aaKnown RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 GPR137BO60478 399 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 MED6O75586 246 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 DEDDO75618 318 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 S1PR2O95136 353 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 LIPFP07098 398 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 SAA2P0DJI9 122 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 PPIAL4GP0DN37 164 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 IGHV1-8P0DP01 117 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 SLC25A6P12236 298 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 CXCL2P19875 107 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 COX7A1P24310 79 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 DUTP33316 252 aaKnown RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 G6PCP35575 357 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 CAV2P51636 162 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMEM33P57088 247 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 RAB14P61106 215 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 RPL23AP62750 156 aaKnown RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 RPL30P62888 115 aaKnown RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 EIF5AP63241 154 aaKnown RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 NDUFA5Q16718 116 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 RTL8BQ17RB0 113 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms