RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 GLYATL2Q8WU03 294 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 MITD1Q8WV92 249 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 TMEM56Q96MV1 263 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 TMEM56-RWDD3S4R434 201 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 FRAS1Q86XX4 4008 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 DUXBA0A1W2PPF3 345 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 C7orf66A4D0T2 115 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 ERVK-16P61578 105 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 TMEM187Q14656 261 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 SP6Q3SY56 376 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 Q6ZNX1 250 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 C12orf45Q8N5I9 185 aaPredicted RBP10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 LRTM2Q8N967 370 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 OR8H1Q8NGG4 311 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 RBPMSQ93062 196 aaKnown RBP10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 TP53RKQ96S44 253 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 GPHA2Q96T91 129 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 TSNAXQ99598 290 aaKnown RBP10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 OR51J1Q9H342 316 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 COMMD9Q9P000 198 aa10.6□□□□□ -0.71
RAPGEF1-204ENST00000414781 FAM90A9PA6NNJ1 464 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 NUDT19A8MXV4 375 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 SHOXO15266 292 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 SSNA1O43805 119 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 CRYZL1O95825 349 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 MOSP00540 346 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 IFNA21P01568 189 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 NQO2P16083 231 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 RPS16P62249 146 aaKnown RBP10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 EBI3Q14213 229 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 HES1Q14469 280 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 TMEM177Q53S58 311 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 OR2B11Q5JQS5 317 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 LIN54Q6MZP7 749 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 CADM3Q8N126 398 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 DYNAPQ8N1N2 210 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 VSTM2AQ8TAG5 236 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 RRNAD1Q96FB5 475 aaKnown RBP10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 SEC22CQ9BRL7 303 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 ZFP57Q9NU63 452 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 TMED3Q9Y3Q3 217 aa10.59□□□□□ -0.71
RAPGEF1-204ENST00000414781 IGHV3-72A0A0B4J1Y9 119 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 IGKV1D-33P01593 117 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 IGKV1-33P01594 117 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 VDAC1P21796 283 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 LINC00205P59089 165 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 ZNF585BQ52M93 769 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 TMEM268Q5VZI3 342 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 C10orf99Q6UWK7 81 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 C8orf86Q6ZUL3 223 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 FAM219AQ8IW50 185 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 UXS1Q8NBZ7 420 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 OR5M8Q8NGP6 311 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 RNASE11Q8TAA1 199 aaKnown RBP10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 MED28Q9H204 178 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 CACFD1Q9UGQ2 172 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 ALG5Q9Y673 324 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 KIAA1109Q2LD37 5005 aa10.58□□□□□ -0.72
RAPGEF1-204ENST00000414781 SPDEFO95238 335 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 SNRNP70P08621 437 aaKnown RBP10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 AKR1C2P52895 323 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 BRWD1-AS2P59051 145 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 ANKRD55Q3KP44 614 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 VMA21Q3ZAQ7 101 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 H2BFWTQ7Z2G1 175 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 SELENOHQ8IZQ5 122 aaKnown RBP10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 DMBX1Q8NFW5 382 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 OR52B4Q8NGK2 314 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 IL17DQ8TAD2 202 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 LSM10Q969L4 123 aaKnown RBP10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 EAF1Q96JC9 268 aaPredicted RBP10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 RHOVQ96L33 236 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 HARBI1Q96MB7 349 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 KIAA1456Q9P272 454 aa10.57□□□□□ -0.72
RAPGEF1-204ENST00000414781 PSMB11A5LHX3 300 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 SEC14L6B5MCN3 397 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 S1PR2O95136 353 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 LY86O95711 162 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 KRASP01116 189 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 IGKV1-16P04430 117 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 FRMD6-AS1P0C7T7 363 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 TMEM11P17152 192 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 UBE2KP61086 200 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 POU2AF1Q16633 256 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 KLHL30-AS1Q8NEE0 82 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 OR4A5Q8NH83 315 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 SPIN2AQ99865 258 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 SPIN2BQ9BPZ2 258 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 TM2D3Q9BRN9 247 aa10.56□□□□□ -0.72
RAPGEF1-204ENST00000414781 MARCH11A6NNE9 402 aa10.55□□□□□ -0.72
RAPGEF1-204ENST00000414781 M0QZK8 103 aa10.55□□□□□ -0.72
RAPGEF1-204ENST00000414781 SNAPC5O75971 98 aa10.55□□□□□ -0.72
RAPGEF1-204ENST00000414781 OR2A4O95047 310 aa10.55□□□□□ -0.72
RAPGEF1-204ENST00000414781 HLA-GP17693 338 aa10.55□□□□□ -0.72
RAPGEF1-204ENST00000414781 HNF4GQ14541 408 aa10.55□□□□□ -0.72
RAPGEF1-204ENST00000414781 THOC7Q6I9Y2 204 aaKnown RBP10.55□□□□□ -0.72
RAPGEF1-204ENST00000414781 SLC35G3Q8N808 338 aa10.55□□□□□ -0.72
RAPGEF1-204ENST00000414781 TEX45Q8NA69 505 aa10.55□□□□□ -0.72
RAPGEF1-204ENST00000414781 NPBQ8NG41 125 aa10.55□□□□□ -0.72
RAPGEF1-204ENST00000414781 SEC22AQ96IW7 307 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms