RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 REG1AP05451 166 aa13.49□□□□□ -0.25
LSM5-204ENST00000409909 CSN3P07498 182 aa13.49□□□□□ -0.25
LSM5-204ENST00000409909 ZNF182P17025 639 aaPredicted RBP13.49□□□□□ -0.25
LSM5-204ENST00000409909 CTRB1P17538 263 aa13.49□□□□□ -0.25
LSM5-204ENST00000409909 ALDH3B2P48448 385 aa13.49□□□□□ -0.25
LSM5-204ENST00000409909 KLK9Q2XQG4 91 aa13.49□□□□□ -0.25
LSM5-204ENST00000409909 CTRB2Q6GPI1 263 aa13.49□□□□□ -0.25
LSM5-204ENST00000409909 MRPS26Q9BYN8 205 aaKnown RBP13.49□□□□□ -0.25
LSM5-204ENST00000409909 TMEM140Q9NV12 185 aa13.49□□□□□ -0.25
LSM5-204ENST00000409909 FBXL7Q9UJT9 491 aa13.49□□□□□ -0.25
LSM5-204ENST00000409909 KLK9Q9UKQ9 250 aa13.49□□□□□ -0.25
LSM5-204ENST00000409909 NBEAL2Q6ZNJ1 2754 aa13.48□□□□□ -0.25
LSM5-204ENST00000409909 NDUFB8O95169 186 aa13.48□□□□□ -0.25
LSM5-204ENST00000409909 F2RP25116 425 aa13.48□□□□□ -0.25
LSM5-204ENST00000409909 ZNF585BQ52M93 769 aa13.48□□□□□ -0.25
LSM5-204ENST00000409909 MZT2AQ6P582 158 aa13.48□□□□□ -0.25
LSM5-204ENST00000409909 DMBX1Q8NFW5 382 aa13.48□□□□□ -0.25
LSM5-204ENST00000409909 FCAMRQ8WWV6 532 aa13.48□□□□□ -0.25
LSM5-204ENST00000409909 DGCR14Q96DF8 476 aaKnown RBP13.48□□□□□ -0.25
LSM5-204ENST00000409909 COMMD9Q9P000 198 aa13.48□□□□□ -0.25
LSM5-204ENST00000409909 KMT2CQ8NEZ4 4911 aaKnown RBP13.47□□□□□ -0.25
LSM5-204ENST00000409909 IGLC7A0M8Q6 106 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 FAM25AB3EWG3 89 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 FAM25CB3EWG5 89 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 FAM25GB3EWG6 89 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 PPP5D1E7EU14 171 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 GPR31O00270 319 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 IGHV3-23P01764 117 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 RCVRNP35243 200 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 LPAR6P43657 344 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 TSPAN5P62079 268 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 TATDN3Q17R31 274 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 CMTM1Q8IZ96 169 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 Q8N1Y9 231 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 AP3S1Q92572 193 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 S4R3C0 116 aa13.47□□□□□ -0.25
LSM5-204ENST00000409909 IGLV11-55A0A075B6I3 123 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 MARCH11A6NNE9 402 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 M0QYG6 137 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 HLA-AP01891 365 aaKnown RBP13.46□□□□□ -0.25
LSM5-204ENST00000409909 FGF2P09038 288 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 PHLDA2Q53GA4 152 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 RNASE12Q5GAN4 147 aaKnown RBP13.46□□□□□ -0.25
LSM5-204ENST00000409909 ADAMTSL5Q6ZMM2 481 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 GPR141Q7Z602 305 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 SBSPONQ8IVN8 264 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 OR10W1Q8NGF6 305 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 CCDC140Q96MF4 163 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 COMMD5Q9GZQ3 224 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 SIGLEC8Q9NYZ4 499 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 KLK11Q9UBX7 282 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 U3KQK5 164 aa13.46□□□□□ -0.25
LSM5-204ENST00000409909 TEX50A0A1B0GTY4 177 aa13.45□□□□□ -0.26
LSM5-204ENST00000409909 DHFRP00374 187 aa13.45□□□□□ -0.26
LSM5-204ENST00000409909 KRASP01116 189 aa13.45□□□□□ -0.26
LSM5-204ENST00000409909 FRMD6-AS1P0C7T7 363 aa13.45□□□□□ -0.26
LSM5-204ENST00000409909 MECP2P51608 486 aaKnown RBP13.45□□□□□ -0.26
LSM5-204ENST00000409909 SPCS2Q15005 226 aa13.45□□□□□ -0.26
LSM5-204ENST00000409909 OR52I2Q8NH67 350 aa13.45□□□□□ -0.26
LSM5-204ENST00000409909 ABHD1Q96SE0 405 aa13.45□□□□□ -0.26
LSM5-204ENST00000409909 MIXL1Q9H2W2 232 aa13.45□□□□□ -0.26
LSM5-204ENST00000409909 EXTL2Q9UBQ6 330 aa13.45□□□□□ -0.26
LSM5-204ENST00000409909 IZUMO1RA6ND01 250 aa13.44□□□□□ -0.26
LSM5-204ENST00000409909 OR2C1O95371 312 aa13.44□□□□□ -0.26
LSM5-204ENST00000409909 DEFA4P12838 97 aa13.44□□□□□ -0.26
LSM5-204ENST00000409909 HIST1H1BP16401 226 aaKnown RBP13.44□□□□□ -0.26
LSM5-204ENST00000409909 G6PCP35575 357 aa13.44□□□□□ -0.26
LSM5-204ENST00000409909 ERVK-16P61578 105 aa13.44□□□□□ -0.26
LSM5-204ENST00000409909 LPCAT3Q6P1A2 487 aa13.44□□□□□ -0.26
LSM5-204ENST00000409909 CLEC19AQ6UXS0 136 aa13.44□□□□□ -0.26
LSM5-204ENST00000409909 WWC2-AS2Q96NR7 200 aa13.44□□□□□ -0.26
LSM5-204ENST00000409909 THAP7Q9BT49 309 aaPredicted RBP13.44□□□□□ -0.26
LSM5-204ENST00000409909 QTRT1Q9BXR0 403 aaKnown RBP13.44□□□□□ -0.26
LSM5-204ENST00000409909 NSG2Q9Y328 171 aa13.44□□□□□ -0.26
LSM5-204ENST00000409909 MFSD2BA6NFX1 497 aa13.43□□□□□ -0.26
LSM5-204ENST00000409909 H0Y980 276 aa13.43□□□□□ -0.26
LSM5-204ENST00000409909 GGCTO75223 188 aaKnown RBP13.43□□□□□ -0.26
LSM5-204ENST00000409909 EDN2P20800 178 aa13.43□□□□□ -0.26
LSM5-204ENST00000409909 UCP3P55916 312 aa13.43□□□□□ -0.26
LSM5-204ENST00000409909 WT1-ASQ06250 92 aa13.43□□□□□ -0.26
LSM5-204ENST00000409909 FAM209BQ5JX69 171 aa13.43□□□□□ -0.26
LSM5-204ENST00000409909 TBC1D26Q86UD7 250 aa13.43□□□□□ -0.26
LSM5-204ENST00000409909 CADM3Q8N126 398 aa13.43□□□□□ -0.26
LSM5-204ENST00000409909 SRSF8Q9BRL6 282 aaKnown RBP13.43□□□□□ -0.26
LSM5-204ENST00000409909 NDUFA4L2Q9NRX3 87 aa13.43□□□□□ -0.26
LSM5-204ENST00000409909 PEMTQ9UBM1 199 aa13.43□□□□□ -0.26
LSM5-204ENST00000409909 CTDSP2O14595 271 aa13.42□□□□□ -0.26
LSM5-204ENST00000409909 CD3DP04234 171 aa13.42□□□□□ -0.26
LSM5-204ENST00000409909 TRAPPC2P0DI81 140 aa13.42□□□□□ -0.26
LSM5-204ENST00000409909 TRAPPC2BP0DI82 140 aa13.42□□□□□ -0.26
LSM5-204ENST00000409909 IGHV4-30-4P0DP06 118 aa13.42□□□□□ -0.26
LSM5-204ENST00000409909 ARL3P36405 182 aa13.42□□□□□ -0.26
LSM5-204ENST00000409909 SLC38A6Q8IZM9 456 aa13.42□□□□□ -0.26
LSM5-204ENST00000409909 EEF1AKMT3Q96AZ1 226 aa13.42□□□□□ -0.26
LSM5-204ENST00000409909 MTFP1Q9UDX5 166 aa13.42□□□□□ -0.26
LSM5-204ENST00000409909 DBX1A6NMT0 343 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 TPPPO94811 219 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 IGKV1-39P01597 117 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 IGKV1D-39P04432 117 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 SERPINE2P07093 398 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms