RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 USF2Q15853 346 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 TMEM176BQ3YBM2 270 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 TMEM244Q5VVB8 128 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 GLT8D1Q68CQ7 371 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 LAMTOR1Q6IAA8 161 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 OPN5Q6U736 354 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 DCXRQ7Z4W1 244 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 DEFB123Q8N688 67 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR11G2Q8NGC1 345 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR51D1Q8NGF3 324 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR1S1Q8NH92 325 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 RNF133Q8WVZ7 376 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 DEDD2Q8WXF8 326 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 C11orf40Q8WZ69 217 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 FAM104AQ969W3 186 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 SLC25A44Q96H78 314 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 HYLS1Q96M11 299 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 UTP23Q9BRU9 249 aaKnown RBP3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 ANGPTL4Q9BY76 406 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 RAB1BQ9H0U4 201 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 DIABLOQ9NR28 239 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 FAM206AQ9NX38 181 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 MED29Q9NX70 200 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 TAS2R8Q9NYW2 309 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 STMN3Q9NZ72 180 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 EMC3Q9P0I2 261 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 ZNRD1Q9P1U0 126 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 CKLFQ9UBR5 152 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR52A1Q9UKL2 312 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 FBXL3Q9UKT7 428 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 HHLA2Q9UM44 414 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 HDGFL3Q9Y3E1 203 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 CHCHD2Q9Y6H1 151 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 SCN3AQ9NY46 2000 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 MEIKINA0A087WXM9 373 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 A0A0A6YYH2 397 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 A0A1B0GVX0 72 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 A0A1B0GVY2 172 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 LOC107986453A0A1B0GWG9 222 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 GGT3PA6NGU5 568 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 A6NJ64 397 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 C9J4A7 227 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 SMLR1H3BR10 107 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 H3BSH0 61 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 SULT1C2O00338 296 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 FABP7O15540 132 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 TRAPPC6AO75865 159 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 IL5P05113 134 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 GP1BAP07359 652 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 SULT1A3P0DMM9 295 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 SULT1A4P0DMN0 295 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 COX6A1P12074 109 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 PTHLHP12272 177 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 GABRA1P14867 456 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 CXCL3P19876 107 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 PRSS3P35030 304 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 DNASE1L1P49184 302 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 DSCR4P56555 118 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 RPL23P62829 140 aaKnown RBP3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 SIGLEC14Q08ET2 396 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 HIST3H3Q16695 136 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 SMUG1Q53HV7 270 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 GLYATL3Q5SZD4 288 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 C3orf33Q6P1S2 294 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 TMPPEQ6ZT21 453 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 RPS19BP1Q86WX3 136 aaKnown RBP3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 LYPD6Q86Y78 171 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 C15orf56Q8N910 161 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR4K17Q8NGC6 315 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR5M1Q8NGP8 315 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR1J4Q8NGS1 313 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR2Y1Q8NGV0 311 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 LILRB4Q8NHJ6 448 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 GRPEL2Q8TAA5 225 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 SRSF12Q8WXF0 261 aaKnown RBP3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 SLAMF6Q96DU3 332 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 SULT4A1Q9BR01 284 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 NDFIP1Q9BT67 221 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 ULBP2Q9BZM5 246 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 PBOV1Q9GZY1 135 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 ATG5Q9H1Y0 275 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 C1orf198Q9H425 327 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 PROK2Q9HC23 129 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 TAS2R4Q9NYW5 299 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 CYB5R1Q9UHQ9 305 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 SCP2D1Q9UJQ7 156 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 ZNF222Q9UK12 451 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 ZNF257Q9Y2Q1 563 aa3.09□□□□□ -1.91
HMGB3P18-201ENST00000406327 RANBP2P49792 3224 aaKnown RBP3.09□□□□□ -1.92
HMGB3P18-201ENST00000406327 XIRP2A4UGR9 3374 aa3.09□□□□□ -1.92
HMGB3P18-201ENST00000406327 TP53BP1Q12888 1972 aaPredicted RBP3.09□□□□□ -1.92
HMGB3P18-201ENST00000406327 TDRD6O60522 2096 aaKnown RBP3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 ATG2BQ96BY7 2078 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 UNC80Q8N2C7 3258 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM131Q92545 1883 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 A0A1B0GTI1 187 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM223A0PJW6 202 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 SNRPGP15A8MWD9 76 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 BPY2O14599 106 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 SSNA1O43805 119 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms