RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 CLDND2Q8NHS1 167 aa15.7■□□□□ 0.1
USP25-204ENST00000400183 RTTNQ86VV8 2226 aa15.7■□□□□ 0.1
USP25-204ENST00000400183 FAM27E3Q08E93 113 aa15.7■□□□□ 0.1
USP25-204ENST00000400183 DNLZQ5SXM8 178 aa15.7■□□□□ 0.1
USP25-204ENST00000400183 FAM74A4Q5TZK3 123 aa15.7■□□□□ 0.1
USP25-204ENST00000400183 C1QL2Q7Z5L3 287 aa15.7■□□□□ 0.1
USP25-204ENST00000400183 COPS9Q8WXC6 57 aa15.7■□□□□ 0.1
USP25-204ENST00000400183 DPM3Q9P2X0 92 aa15.7■□□□□ 0.1
USP25-204ENST00000400183 ZNF56Q15929 161 aa15.7■□□□□ 0.1
USP25-204ENST00000400183 TM4SF5O14894 197 aa15.69■□□□□ 0.1
USP25-204ENST00000400183 HIST1H1AQ02539 215 aaPredicted RBP15.69■□□□□ 0.1
USP25-204ENST00000400183 IGHV3OR16-10A0A075B7F0 116 aa15.69■□□□□ 0.1
USP25-204ENST00000400183 CENPWQ5EE01 88 aa15.69■□□□□ 0.1
USP25-204ENST00000400183 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.69■□□□□ 0.1
USP25-204ENST00000400183 IL6RP08887 468 aaPredicted RBP15.69■□□□□ 0.1
USP25-204ENST00000400183 KLK15Q9H2R5 256 aa15.69■□□□□ 0.1
USP25-204ENST00000400183 RPRMQ9NS64 109 aa15.69■□□□□ 0.1
USP25-204ENST00000400183 FOXI3A8MTJ6 420 aaPredicted RBP15.68■□□□□ 0.1
USP25-204ENST00000400183 COL4A1P02462 1669 aa15.68■□□□□ 0.1
USP25-204ENST00000400183 TRGV3P03979 118 aa15.68■□□□□ 0.1
USP25-204ENST00000400183 IFI27L2Q9H2X8 130 aa15.68■□□□□ 0.1
USP25-204ENST00000400183 ALPK2Q86TB3 2170 aa15.68■□□□□ 0.1
USP25-204ENST00000400183 TDRD6O60522 2096 aaKnown RBP15.68■□□□□ 0.1
USP25-204ENST00000400183 VENTXO95231 258 aa15.68■□□□□ 0.1
USP25-204ENST00000400183 ZNF600Q6ZNG1 722 aa15.68■□□□□ 0.1
USP25-204ENST00000400183 NUP37Q8NFH4 326 aa15.68■□□□□ 0.1
USP25-204ENST00000400183 RCC1LQ96I51 464 aaKnown RBP15.67■□□□□ 0.1
USP25-204ENST00000400183 GEMIN7Q9H840 131 aaKnown RBP15.67■□□□□ 0.1
USP25-204ENST00000400183 LINC00587B1AMM8 73 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 GPX4P36969 197 aaPredicted RBP15.67■□□□□ 0.1
USP25-204ENST00000400183 SSBP3Q9BWW4 388 aaPredicted RBP15.67■□□□□ 0.1
USP25-204ENST00000400183 ARFGEF1Q9Y6D6 1849 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 OTX1P32242 354 aaPredicted RBP15.67■□□□□ 0.1
USP25-204ENST00000400183 ZNF506Q5JVG8 444 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 CYB5R2Q6BCY4 276 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 OR4D5Q8NGN0 318 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 CARHSP1Q9Y2V2 147 aaKnown RBP15.67■□□□□ 0.1
USP25-204ENST00000400183 TRBV20OR9-2A0A075B6H5 130 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 IGKV1D-43A0A0B4J1Z2 117 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 TAS2R60P59551 318 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 HBBP68871 147 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 ICAM4Q14773 271 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 NPCDR1Q9BY65 106 aa15.67■□□□□ 0.1
USP25-204ENST00000400183 PARD6GQ9BYG4 376 aaPredicted RBP15.67■□□□□ 0.1
USP25-204ENST00000400183 EP300Q09472 2414 aaPredicted RBP15.66■□□□□ 0.1
USP25-204ENST00000400183 UCP1P25874 307 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 LINC00469Q8N7U9 141 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 MYO16Q9Y6X6 1858 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 MEIG1Q5JSS6 88 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 ARL6IP6Q8N6S5 226 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 NEU4Q8WWR8 484 aaPredicted RBP15.66■□□□□ 0.1
USP25-204ENST00000400183 IGHV3OR16-13A0A075B7E8 117 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 IGHV3-74A0A0B4J1X5 117 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 NBEAP1P0C6P0 100 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 C1QTNF5Q9BXJ0 243 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 FBXL15Q9H469 300 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 IGLV3-19P01714 112 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 SCGB1A1P11684 91 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 C19orf48Q6RUI8 117 aa15.66■□□□□ 0.1
USP25-204ENST00000400183 C7orf71A4D174 169 aa15.65■□□□□ 0.1
USP25-204ENST00000400183 PF4P02776 101 aa15.65■□□□□ 0.1
USP25-204ENST00000400183 FAM216BQ8N7L0 139 aa15.65■□□□□ 0.1
USP25-204ENST00000400183 EGR1P18146 543 aa15.65■□□□□ 0.1
USP25-204ENST00000400183 WFIKKN1Q96NZ8 548 aa15.65■□□□□ 0.1
USP25-204ENST00000400183 PLSCR2Q9NRY7 297 aa15.65■□□□□ 0.1
USP25-204ENST00000400183 IGHV2OR16-5A0A0B4J2B6 119 aa15.65■□□□□ 0.1
USP25-204ENST00000400183 TGFBR3LH3BV60 316 aa15.65■□□□□ 0.1
USP25-204ENST00000400183 LCN2P80188 198 aa15.65■□□□□ 0.1
USP25-204ENST00000400183 RSPO4Q2I0M5 234 aaPredicted RBP15.65■□□□□ 0.1
USP25-204ENST00000400183 REPIN1Q9BWE0 567 aaKnown RBP15.65■□□□□ 0.1
USP25-204ENST00000400183 AKIRIN1Q9H9L7 192 aaPredicted RBP15.65■□□□□ 0.1
USP25-204ENST00000400183 NPIPB7O75200 414 aa15.64■□□□□ 0.1
USP25-204ENST00000400183 SOD3P08294 240 aa15.64■□□□□ 0.1
USP25-204ENST00000400183 PLP1P60201 277 aa15.64■□□□□ 0.1
USP25-204ENST00000400183 KBTBD11-OT1A0A1B0GTJ5 212 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 GRIFINA4D1Z8 144 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 CEACAM4O75871 244 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 IGKV3-20P01619 116 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 OR13A1Q8NGR1 328 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 IMMP1LQ96LU5 166 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 ZNFX1Q9P2E3 1918 aaKnown RBP15.64■□□□□ 0.09
USP25-204ENST00000400183 MEF2CQ06413 473 aaPredicted RBP15.64■□□□□ 0.09
USP25-204ENST00000400183 AKAP6Q13023 2319 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 NUTF2P61970 127 aaKnown RBP15.64■□□□□ 0.09
USP25-204ENST00000400183 FAM57AQ8TBR7 257 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 A0A0G2JLM5 398 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 PPP1R17O96001 155 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 PSG7Q13046 419 aa15.64■□□□□ 0.09
USP25-204ENST00000400183 JOSD1Q15040 202 aaPredicted RBP15.64■□□□□ 0.09
USP25-204ENST00000400183 C17orf98A8MV24 154 aa15.63■□□□□ 0.09
USP25-204ENST00000400183 CEACAM1P13688 526 aa15.63■□□□□ 0.09
USP25-204ENST00000400183 RTN4RL2Q86UN3 420 aa15.63■□□□□ 0.09
USP25-204ENST00000400183 FBXL7Q9UJT9 491 aa15.63■□□□□ 0.09
USP25-204ENST00000400183 MRPS16Q9Y3D3 137 aaKnown RBP15.63■□□□□ 0.09
USP25-204ENST00000400183 FAM201AQ5SY85 155 aa15.63■□□□□ 0.09
USP25-204ENST00000400183 EFEMP2O95967 443 aa15.63■□□□□ 0.09
USP25-204ENST00000400183 BSPH1Q075Z2 132 aa15.63■□□□□ 0.09
USP25-204ENST00000400183 FAM90A1Q86YD7 464 aa15.63■□□□□ 0.09
USP25-204ENST00000400183 C21orf62Q9NYP8 219 aa15.63■□□□□ 0.09
USP25-204ENST00000400183 CACNA1EQ15878 2313 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms