RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TCF19Q9Y242 345 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 DOCK10Q96BY6 2186 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 FBLL1A6NHQ2 334 aaKnown RBP4.65□□□□□ -1.67
VPS13C-204ENST00000395898 RECKO95980 971 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 LGALS3P17931 250 aaKnown RBP4.65□□□□□ -1.67
VPS13C-204ENST00000395898 GLIPR1P48060 266 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 GUCD1Q96NT3 240 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 CHODLQ9H9P2 273 aa4.65□□□□□ -1.67
VPS13C-204ENST00000395898 GTF3C1Q12789 2109 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM250H0YL14 139 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 HAX1O00165 279 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM187Q14656 261 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 FXYD3Q14802 87 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 PSMG4Q5JS54 123 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 FAM209BQ5JX69 171 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 ACP7Q6ZNF0 438 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 APCDD1LQ8NCL9 501 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 LOC107984156A0A0G2JMH3 177 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 GAGE10A6NGK3 116 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 HBBP68871 147 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 ARL17AQ8IVW1 177 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 NUP37Q8NFH4 326 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 DUX5Q96PT3 197 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM74BQ9NUR3 256 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 NCKAP5O14513 1909 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 NLRC5Q86WI3 1866 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 IGKV1D-42A0A075B6H8 117 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 CRYBB3P26998 211 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 TFPI2P48307 235 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 TGIF1Q15583 401 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 KCNE5Q9UJ90 142 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF250P15622 560 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 VKORC1L1Q8N0U8 176 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 ZNRF1Q8ND25 227 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 MEGF10Q96KG7 1140 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM106BQ9NUM4 274 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 DPM3Q9P2X0 92 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 A0A0B4J293 547 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 TIAF1O95411 115 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 DNAL4O96015 105 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 FMC1Q96HJ9 113 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 IGHV3OR16-12A0A075B7B8 117 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 A0A1W2PR77 199 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 HINT1P49773 126 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-204ENST00000395898 CACNG8Q8WXS5 425 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 C1QTNF5Q9BXJ0 243 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 SH3BGRL3Q9H299 93 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 MED12Q93074 2177 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 CADP27708 2225 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF407Q9C0G0 2248 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 IFITM3Q01628 133 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 CYP2G1PQ6ZSU1 146 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 SLC25A38Q96DW6 304 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 NEU1Q99519 415 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 IGKV3D-15A0A087WSY6 115 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 IGKV3-15P01624 115 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 REG1AP05451 166 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 MEF2CQ06413 473 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF56Q15929 161 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 PRSS8Q16651 343 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 OR4A47Q6IF82 309 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 ZIC4Q8N9L1 334 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 SPTBN2O15020 2390 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 NPFFO15130 113 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 IL4P05112 153 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 FOXL2P58012 376 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 DNLZQ5SXM8 178 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 Q6AWC8 147 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM101Q96IK0 257 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 GDF15Q99988 308 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 WFDC6Q9BQY6 131 aa4.64□□□□□ -1.67
VPS13C-204ENST00000395898 F12P00748 615 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-204ENST00000395898 PRSS2P07478 247 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 RND3P61587 244 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 MBNL2Q5VZF2 373 aaKnown RBP4.63□□□□□ -1.67
VPS13C-204ENST00000395898 LRTM2Q8N967 370 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 FAM168AQ92567 244 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 C1QL1O75973 258 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 PLAUP00749 431 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 NBEAP1P0C6P0 100 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 CSRP3P50461 194 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 SPRED2Q7Z698 418 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 MRAP2Q96G30 205 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 LMX1BO60663 402 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM136Q6ZRR5 245 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 SGK494Q96LW2 274 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 PIN1P1O15428 100 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 KLF4O43474 513 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 C1QTNF12Q5T7M4 302 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 POC1AQ8NBT0 407 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 NPIPB3Q92617 1050 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 SIGLEC12Q96PQ1 595 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 C4orf51C9J302 202 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 TAS2R60P59551 318 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 PPP1R32Q7Z5V6 425 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 REPIN1Q9BWE0 567 aaKnown RBP4.63□□□□□ -1.67
VPS13C-204ENST00000395898 RTN4RQ9BZR6 473 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF25P17030 456 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-204ENST00000395898 GOLT1AQ6ZVE7 132 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 SOX21Q9Y651 276 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms