RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ZNF469Q96JG9 3925 aaPredicted RBP10.98□□□□□ -0.65
VAPB-202ENST00000395802 MSGN1A6NI15 193 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 SYNGR2O43760 224 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 SLC25A17O43808 307 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 FSHBP01225 129 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 IGLV2-23P01705 113 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 OR9G9P0C7N8 305 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 FOSL1P15407 271 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 TNFRSF9Q07011 255 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 PSG5Q15238 335 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 PDLIM3Q53GG5 364 aaPredicted RBP10.98□□□□□ -0.65
VAPB-202ENST00000395802 CXorf66Q5JRM2 361 aaPredicted RBP10.98□□□□□ -0.65
VAPB-202ENST00000395802 PPP1R27Q86WC6 154 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 AQP10Q96PS8 301 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 ENY2Q9NPA8 101 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 TMEM14BQ9NUH8 114 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 TMEM160Q9NX00 188 aa10.98□□□□□ -0.65
VAPB-202ENST00000395802 METTL1Q9UBP6 276 aaKnown RBP10.98□□□□□ -0.65
VAPB-202ENST00000395802 RCL1Q9Y2P8 373 aaKnown RBP10.98□□□□□ -0.65
VAPB-202ENST00000395802 RRHO14718 337 aa10.97□□□□□ -0.65
VAPB-202ENST00000395802 HSPE1P61604 102 aaKnown RBP10.97□□□□□ -0.65
VAPB-202ENST00000395802 RPP30P78346 268 aaKnown RBP10.97□□□□□ -0.65
VAPB-202ENST00000395802 IZUMO4Q1ZYL8 232 aa10.97□□□□□ -0.65
VAPB-202ENST00000395802 ZNF767PQ75MW2 155 aa10.97□□□□□ -0.65
VAPB-202ENST00000395802 SSX3Q99909 188 aa10.97□□□□□ -0.65
VAPB-202ENST00000395802 HIPK2Q9H2X6 1198 aa10.97□□□□□ -0.65
VAPB-202ENST00000395802 SIGLEC9Q9Y336 463 aa10.97□□□□□ -0.65
VAPB-202ENST00000395802 OR51B2Q9Y5P1 312 aa10.97□□□□□ -0.65
VAPB-202ENST00000395802 WSB1Q9Y6I7 421 aa10.97□□□□□ -0.65
VAPB-202ENST00000395802 BTBD17A6NE02 478 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 NCBP2LA6PVI3 153 aaKnown RBP10.96□□□□□ -0.65
VAPB-202ENST00000395802 BCL2L11O43521 198 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 NDUFA3O95167 84 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 CFDP00746 253 aaPredicted RBP10.96□□□□□ -0.65
VAPB-202ENST00000395802 F2RL1P55085 397 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 TAS2R30P59541 319 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 RPL23AP62750 156 aaKnown RBP10.96□□□□□ -0.65
VAPB-202ENST00000395802 HNF4GQ14541 408 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 Q8N6K4 173 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 ZNF680Q8NEM1 530 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 QTRT1Q9BXR0 403 aaKnown RBP10.96□□□□□ -0.65
VAPB-202ENST00000395802 C11orf1Q9H5F2 150 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 YAE1D1Q9NRH1 226 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 BAHCC1Q9P281 2608 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 ZANQ9Y493 2812 aa10.96□□□□□ -0.65
VAPB-202ENST00000395802 TEX15Q9BXT5 2789 aa10.96□□□□□ -0.66
VAPB-202ENST00000395802 CEBPZOSA8MTT3 80 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 CHST1O43916 411 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 SSSCA1O60232 199 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 SCAF4O95104 1147 aaKnown RBP10.95□□□□□ -0.66
VAPB-202ENST00000395802 SRP14P37108 136 aaKnown RBP10.95□□□□□ -0.66
VAPB-202ENST00000395802 P2RY1P47900 373 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 OR2B8PP59922 312 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 POLR2GP62487 172 aaKnown RBP eCLIP10.95□□□□□ -0.66
VAPB-202ENST00000395802 PRSS8Q16651 343 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 FAM120AOSQ5T036 256 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 C16orf82Q7Z2V1 217 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 OR1L8Q8NGR8 309 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 OR5R1Q8NH85 324 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 ZDHHC16Q969W1 377 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 RITA1Q96K30 269 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 TET2Q6N021 2002 aaPredicted RBP10.95□□□□□ -0.66
VAPB-202ENST00000395802 KANTRA0A1W2PQU2 76 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 M0QZK8 103 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 HKR1P10072 659 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 CD24P25063 80 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 EXOSC2Q13868 293 aaKnown RBP10.95□□□□□ -0.66
VAPB-202ENST00000395802 SLC51BQ86UW2 128 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 DTD1Q8TEA8 209 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 SLC25A31Q9H0C2 315 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 MAGT1Q9H0U3 335 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 ZNF430Q9H8G1 570 aaPredicted RBP10.95□□□□□ -0.66
VAPB-202ENST00000395802 PLEKHA3Q9HB20 300 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 CSPG4Q6UVK1 2322 aa10.95□□□□□ -0.66
VAPB-202ENST00000395802 TRAV3A0A0B4J244 114 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 A0A1W2PN81 502 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 CRYGBP07316 175 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 PAX6P26367 422 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 CHRNA7P36544 502 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 ATP5IP56385 69 aaPredicted RBP10.94□□□□□ -0.66
VAPB-202ENST00000395802 PRCDQ00LT1 54 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 C5orf64Q2M2E5 130 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 HSD17B13Q7Z5P4 300 aaPredicted RBP10.94□□□□□ -0.66
VAPB-202ENST00000395802 SMIM8Q96KF7 97 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 FAM210AQ96ND0 272 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 RASL11BQ9BPW5 248 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 RBKSQ9H477 322 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 ZC4H2Q9NQZ6 224 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 TCF19Q9Y242 345 aa10.94□□□□□ -0.66
VAPB-202ENST00000395802 FGF16O43320 207 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 NXPH3O95157 252 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 IFNA7P01567 189 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 CD99P14209 185 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 HOXA1P49639 335 aaPredicted RBP10.93□□□□□ -0.66
VAPB-202ENST00000395802 CAV2P51636 162 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 OR2C3Q8N628 320 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 RBM14Q96PK6 669 aaKnown RBP10.93□□□□□ -0.66
VAPB-202ENST00000395802 ARPC5LQ9BPX5 153 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 FBXL15Q9H469 300 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 LYRM2Q9NU23 88 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms