RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 EGR2P11161 476 aaPredicted RBP5.31□□□□□ -1.56
UBBP1-201ENST00000392399 ANXA3P12429 323 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 PI3P19957 117 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 UCP1P25874 307 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 RPL8P62917 257 aaKnown RBP5.31□□□□□ -1.56
UBBP1-201ENST00000392399 CFHR3Q02985 330 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 PJVKQ0ZLH3 352 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 RBMS2Q15434 407 aaKnown RBP5.31□□□□□ -1.56
UBBP1-201ENST00000392399 MRGPRG-AS1Q2M3A8 158 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 TMEM128Q5BJH2 165 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 CXorf66Q5JRM2 361 aaPredicted RBP5.31□□□□□ -1.56
UBBP1-201ENST00000392399 THOC7Q6I9Y2 204 aaKnown RBP5.31□□□□□ -1.56
UBBP1-201ENST00000392399 OR4A47Q6IF82 309 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 SSX9Q7RTT3 188 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 ZNF329Q86UD4 541 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 SLC25A42Q86VD7 318 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 VKORC1L1Q8N0U8 176 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 OR5M8Q8NGP6 311 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 ABHD5Q8WTS1 349 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 GLYATL2Q8WU03 294 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 GALNT14Q96FL9 552 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 SRSF8Q9BRL6 282 aaKnown RBP5.31□□□□□ -1.56
UBBP1-201ENST00000392399 TMEM222Q9H0R3 208 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 ALX4Q9H161 411 aaPredicted RBP5.31□□□□□ -1.56
UBBP1-201ENST00000392399 SLA2Q9H6Q3 261 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 NAA60Q9H7X0 242 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 ZNF430Q9H8G1 570 aaPredicted RBP5.31□□□□□ -1.56
UBBP1-201ENST00000392399 TPSG1Q9NRR2 321 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 LINC00527Q9UJ94 153 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 FOXA2Q9Y261 457 aaPredicted RBP5.31□□□□□ -1.56
UBBP1-201ENST00000392399 VWFP04275 2813 aa5.31□□□□□ -1.56
UBBP1-201ENST00000392399 TRRAPQ9Y4A5 3859 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 LINC00854A0A1B0GVQ3 168 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 TCRBV4S1A1TA0A5B7 111 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 HMX3A6NHT5 357 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 MSGN1A6NI15 193 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 SNRPGP15A8MWD9 76 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 H3BUA1 57 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 ARPC1BO15143 372 aaKnown RBP5.3□□□□□ -1.56
UBBP1-201ENST00000392399 H2AFB2P0C5Z0 115 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 CD28P10747 220 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 HLA-GP17693 338 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 PSMB8P28062 276 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 RPL27AP46776 148 aaKnown RBP5.3□□□□□ -1.56
UBBP1-201ENST00000392399 CDX1P47902 265 aaPredicted RBP5.3□□□□□ -1.56
UBBP1-201ENST00000392399 RAB25P57735 213 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 UBE2MP61081 183 aaKnown RBP5.3□□□□□ -1.56
UBBP1-201ENST00000392399 GNB1P62873 340 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 SRPXP78539 464 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 SSBP2P81877 361 aaPredicted RBP5.3□□□□□ -1.56
UBBP1-201ENST00000392399 NDPQ00604 133 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 SRSF4Q08170 494 aaKnown RBP5.3□□□□□ -1.56
UBBP1-201ENST00000392399 TNXAQ16473 311 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 TATDN3Q17R31 274 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 C2orf68Q2NKX9 166 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 C19orf54Q5BKX5 351 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 TCTEX1D4Q5JR98 221 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 TMEM65Q6PI78 240 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 UNQ5815/PRO19632Q6UWF5 114 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 H2BFWTQ7Z2G1 175 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 HSD17B13Q7Z5P4 300 aaPredicted RBP5.3□□□□□ -1.56
UBBP1-201ENST00000392399 FAM219AQ8IW50 185 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 LFNGQ8NES3 379 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 GRPEL2Q8TAA5 225 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 SRSF12Q8WXF0 261 aaKnown RBP5.3□□□□□ -1.56
UBBP1-201ENST00000392399 IL22RA2Q969J5 263 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 RRNAD1Q96FB5 475 aaKnown RBP5.3□□□□□ -1.56
UBBP1-201ENST00000392399 SEC22AQ96IW7 307 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 TMEM56Q96MV1 263 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 TP53RKQ96S44 253 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 PHB2Q99623 299 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 CITED2Q99967 270 aaPredicted RBP5.3□□□□□ -1.56
UBBP1-201ENST00000392399 NEURL2Q9BR09 285 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 COMMD5Q9GZQ3 224 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 C20orf85Q9H1P6 137 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 TMEM140Q9NV12 185 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 NUDT15Q9NV35 164 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 CACFD1Q9UGQ2 172 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 PRNDQ9UKY0 176 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 VSIG4Q9Y279 399 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 FBXO7Q9Y3I1 522 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 WSB1Q9Y6I7 421 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 TMEM56-RWDD3S4R434 201 aa5.3□□□□□ -1.56
UBBP1-201ENST00000392399 hCG_2014768A0A024R1R8 64 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 A0A0B4J293 547 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 A0A0G2JLM5 398 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 A0A1W2PN81 502 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 G3V318 75 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 IGKV1-39P01597 117 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 IGKV1D-39P04432 117 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 OR5AC1P0C628 307 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 AKR1C4P17516 323 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 G6PCP35575 357 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 CHRNA7P36544 502 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 RAB9AP51151 201 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 RPL23AP62750 156 aaKnown RBP5.29□□□□□ -1.56
UBBP1-201ENST00000392399 ECSCRQ19T08 205 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 SP6Q3SY56 376 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 ZNF429Q86V71 674 aa5.29□□□□□ -1.56
UBBP1-201ENST00000392399 ZNF695Q8IW36 515 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms