RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ESDP10768 282 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 CCL20P78556 96 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 MRPS16Q9Y3D3 137 aaKnown RBP13.76□□□□□ -0.21
SHANK1-204ENST00000391814 SPINT1O43278 529 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 IGHMP01871 453 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 EBLN2Q6P2I7 272 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 INO80CQ6PI98 192 aaPredicted RBP13.75□□□□□ -0.21
SHANK1-204ENST00000391814 C1RLQ9NZP8 487 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 HIGD1CA8MV81 97 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 TMEM262E9PQX1 116 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 UCP2P55851 309 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 TMEM56-RWDD3S4R434 201 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 HOXA3O43365 443 aaPredicted RBP13.75□□□□□ -0.21
SHANK1-204ENST00000391814 FADS6Q8N9I5 356 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 OR4X2Q8NGF9 303 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 FMC1Q96HJ9 113 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 NUP214P35658 2090 aaPredicted RBP13.75□□□□□ -0.21
SHANK1-204ENST00000391814 TRAV12-3A0A0B4J271 114 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 IGHV1OR15-9A0A0B4J2B8 117 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 LRTM2Q8N967 370 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 A0A0J9YW62 118 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 C17orf51A8MQB3 221 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 FBXW9Q5XUX1 488 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 UNQ5815/PRO19632Q6UWF5 114 aa13.75□□□□□ -0.21
SHANK1-204ENST00000391814 GEMIN7Q9H840 131 aaKnown RBP13.75□□□□□ -0.21
SHANK1-204ENST00000391814 MGST3O14880 152 aa13.74□□□□□ -0.21
SHANK1-204ENST00000391814 NPIPB3Q92617 1050 aa13.74□□□□□ -0.21
SHANK1-204ENST00000391814 MS4A5Q9H3V2 200 aa13.74□□□□□ -0.21
SHANK1-204ENST00000391814 C2orf88Q9BSF0 95 aa13.74□□□□□ -0.21
SHANK1-204ENST00000391814 HEXA-AS1Q9H8Q6 139 aa13.74□□□□□ -0.21
SHANK1-204ENST00000391814 C1orf185Q5T7R7 199 aa13.74□□□□□ -0.21
SHANK1-204ENST00000391814 WDR82Q6UXN9 313 aa13.74□□□□□ -0.21
SHANK1-204ENST00000391814 PSG1P11464 419 aa13.74□□□□□ -0.21
SHANK1-204ENST00000391814 ZNF525Q8N782 197 aa13.74□□□□□ -0.21
SHANK1-204ENST00000391814 MPV17P39210 176 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 C1orf194Q5T5A4 169 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 IGKV3-20P01619 116 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 NXPH1P58417 271 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 ZFAND6Q6FIF0 208 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 GTSF1LQ9H1H1 148 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 CSRP3P50461 194 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 ZNF658BQ4V348 819 aaPredicted RBP13.73□□□□□ -0.21
SHANK1-204ENST00000391814 RPL39P5Q59GN2 51 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 ADAMTSL3P82987 1691 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 ATAD5Q96QE3 1844 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 A0A1W2PQM1 296 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 GPX1P07203 203 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 KIR2DL4Q99706 377 aa13.73□□□□□ -0.21
SHANK1-204ENST00000391814 GNG5P63218 68 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 OR5AN1Q8NGI8 311 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 PPIAL4EA0A075B759 164 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 ATP5LO75964 103 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 IGHV3-23P01764 117 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 PPIAL4FP0DN26 164 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 STARD6P59095 220 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 C10orf128Q5T292 105 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 FHL5Q5TD97 284 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 UBALD2Q8IYN6 164 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 PPIAL4AQ9Y536 164 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 SYNGR3O43761 229 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 CELA2AP08217 269 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 SAXO1Q8IYX7 474 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 LOXL4Q96JB6 756 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 CRIM1Q9NZV1 1036 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 CD5P06127 495 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 CRYBA2P53672 197 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 CHODLQ9H9P2 273 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 NPFFO15130 113 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 ITGBL1O95965 494 aaPredicted RBP13.72□□□□□ -0.21
SHANK1-204ENST00000391814 PYY3Q5JQD4 70 aa13.72□□□□□ -0.21
SHANK1-204ENST00000391814 TMEM155Q4W5P6 130 aa13.71□□□□□ -0.21
SHANK1-204ENST00000391814 RIPPLY2Q5TAB7 128 aa13.71□□□□□ -0.21
SHANK1-204ENST00000391814 SFXN3Q9BWM7 321 aa13.71□□□□□ -0.21
SHANK1-204ENST00000391814 CCDC88CQ9P219 2028 aa13.71□□□□□ -0.21
SHANK1-204ENST00000391814 PROB1E7EW31 1015 aa13.71□□□□□ -0.21
SHANK1-204ENST00000391814 TTTY12Q9BZ98 90 aa13.71□□□□□ -0.21
SHANK1-204ENST00000391814 GAGE13Q4V321 117 aa13.71□□□□□ -0.21
SHANK1-204ENST00000391814 VSIRQ9H7M9 311 aa13.71□□□□□ -0.21
SHANK1-204ENST00000391814 A0A1B0GUT8 65 aa13.71□□□□□ -0.21
SHANK1-204ENST00000391814 PNKDQ8N490 385 aa13.71□□□□□ -0.21
SHANK1-204ENST00000391814 COL11A1P12107 1806 aaPredicted RBP13.71□□□□□ -0.22
SHANK1-204ENST00000391814 ODAMA1E959 279 aa13.71□□□□□ -0.22
SHANK1-204ENST00000391814 EREGO14944 169 aa13.71□□□□□ -0.22
SHANK1-204ENST00000391814 TSPOP30536 169 aa13.71□□□□□ -0.22
SHANK1-204ENST00000391814 TDGF1P3P51864 188 aa13.71□□□□□ -0.22
SHANK1-204ENST00000391814 MFAP4P55083 255 aa13.71□□□□□ -0.22
SHANK1-204ENST00000391814 SUMO2P61956 95 aaKnown RBP13.71□□□□□ -0.22
SHANK1-204ENST00000391814 TFF2Q03403 129 aa13.71□□□□□ -0.22
SHANK1-204ENST00000391814 NPFFR1Q9GZQ6 430 aa13.71□□□□□ -0.22
SHANK1-204ENST00000391814 IGHV5-10-1A0A0J9YXX1 117 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 H0YIZ8 118 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 OR2K2Q8NGT1 345 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 MARF1Q9Y4F3 1742 aaKnown RBP13.7□□□□□ -0.22
SHANK1-204ENST00000391814 SMAD7O15105 426 aaKnown RBP13.7□□□□□ -0.22
SHANK1-204ENST00000391814 PF4V1P10720 104 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 PRR31Q5SQ13 230 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 DDB2Q92466 427 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 CYSLTR1Q9Y271 337 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 TRAV24A0A0B4J272 114 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 SPEM1Q8N4L4 309 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms