RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SMIM17P0DL12 118 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 FABP2P12104 132 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 FOXA3P55318 350 aaPredicted RBP12.6□□□□□ -0.39
VLDLR-202ENST00000382099 SEC11AP67812 179 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 TM4SF20Q53R12 229 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 CENPWQ5EE01 88 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 SHISA6Q6ZSJ9 500 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 TMEM116Q8NCL8 245 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 VSTM2AQ8TAG5 236 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 LSM10Q969L4 123 aaKnown RBP12.6□□□□□ -0.39
VLDLR-202ENST00000382099 STRADBQ9C0K7 418 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 NCOA6Q14686 2063 aaPredicted RBP12.6□□□□□ -0.39
VLDLR-202ENST00000382099 PCDH15Q96QU1 1955 aa12.6□□□□□ -0.39
VLDLR-202ENST00000382099 PRSS38A1L453 326 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 FTH1P19P0C7X4 201 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 TMEM240Q5SV17 173 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 SAP30LQ9HAJ7 183 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 IL36RNQ9UBH0 155 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 SLC17A4Q9Y2C5 497 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 YTHDF2Q9Y5A9 579 aaKnown RBP12.59□□□□□ -0.39
VLDLR-202ENST00000382099 ABCA7Q8IZY2 2146 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 SYS1-DBNDD2H3BUS1 97 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 CNIH1O95406 144 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 SPINK2P20155 84 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 TIGITQ495A1 244 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 NHLRC2Q8NBF2 726 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 MRAP2Q96G30 205 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 IL23AQ9NPF7 189 aa12.59□□□□□ -0.39
VLDLR-202ENST00000382099 COL8A2P25067 703 aa12.58□□□□□ -0.39
VLDLR-202ENST00000382099 PSG3Q16557 428 aa12.58□□□□□ -0.39
VLDLR-202ENST00000382099 C16orf47Q6ZP98 133 aaPredicted RBP12.58□□□□□ -0.39
VLDLR-202ENST00000382099 SPACA3Q8IXA5 215 aa12.58□□□□□ -0.39
VLDLR-202ENST00000382099 ZDHHC16Q969W1 377 aa12.58□□□□□ -0.39
VLDLR-202ENST00000382099 IFI6P09912 130 aa12.58□□□□□ -0.4
VLDLR-202ENST00000382099 ADAMTSL5Q6ZMM2 481 aa12.58□□□□□ -0.4
VLDLR-202ENST00000382099 OR5A1Q8NGJ0 315 aa12.58□□□□□ -0.4
VLDLR-202ENST00000382099 A0A0J9YY10 115 aa12.58□□□□□ -0.4
VLDLR-202ENST00000382099 ZG16O60844 167 aa12.58□□□□□ -0.4
VLDLR-202ENST00000382099 RBM11P57052 281 aaKnown RBP12.58□□□□□ -0.4
VLDLR-202ENST00000382099 RUNX3Q13761 415 aa12.58□□□□□ -0.4
VLDLR-202ENST00000382099 VWC2Q2TAL6 325 aa12.58□□□□□ -0.4
VLDLR-202ENST00000382099 COX19Q49B96 90 aa12.58□□□□□ -0.4
VLDLR-202ENST00000382099 TMEM14EPQ6UXP3 125 aa12.58□□□□□ -0.4
VLDLR-202ENST00000382099 SCRT2Q9NQ03 307 aa12.58□□□□□ -0.4
VLDLR-202ENST00000382099 HELTA6NFD8 242 aa12.57□□□□□ -0.4
VLDLR-202ENST00000382099 HBZP02008 142 aa12.57□□□□□ -0.4
VLDLR-202ENST00000382099 TPRX1Q8N7U7 411 aa12.57□□□□□ -0.4
VLDLR-202ENST00000382099 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.57□□□□□ -0.4
VLDLR-202ENST00000382099 H3BRM9 83 aa12.57□□□□□ -0.4
VLDLR-202ENST00000382099 RRHO14718 337 aa12.57□□□□□ -0.4
VLDLR-202ENST00000382099 GJC3Q8NFK1 279 aa12.57□□□□□ -0.4
VLDLR-202ENST00000382099 HES4Q9HCC6 221 aa12.57□□□□□ -0.4
VLDLR-202ENST00000382099 NCOR1O75376 2440 aa12.57□□□□□ -0.4
VLDLR-202ENST00000382099 KIR2DS1A0A191URI9 304 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 PSMB11A5LHX3 300 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 COL9A1P20849 921 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 KIR2DS4P43632 304 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 HERV-K104P63124 156 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 ATP5G2Q06055 141 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 KIR2DS1Q14954 304 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 IBA57Q5T440 356 aaKnown RBP12.56□□□□□ -0.4
VLDLR-202ENST00000382099 IGKV1-6A0A0C4DH72 117 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 GATA3P23771 443 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 ZNF816Q0VGE8 651 aaPredicted RBP12.56□□□□□ -0.4
VLDLR-202ENST00000382099 CEACAM16Q2WEN9 425 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 SPATA31B1PQ5VZV4 182 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 FGFRL1Q8N441 504 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 SSMEM1Q8WWF3 244 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 ZNF479Q96JC4 524 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 ADAMTS9Q9P2N4 1935 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 FRG2CA6NGY1 282 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 CLPSP04118 112 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 CD24P25063 80 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 RNFT1Q5M7Z0 435 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 MIC13Q5XKP0 118 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 LHFPL2Q6ZUX7 228 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 NEU4Q8WWR8 484 aaPredicted RBP12.56□□□□□ -0.4
VLDLR-202ENST00000382099 OR2V2Q96R30 315 aa12.56□□□□□ -0.4
VLDLR-202ENST00000382099 EPOPA6NHQ4 379 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 G6PCP35575 357 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 ZNF611Q8N823 705 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 ZNF257Q9Y2Q1 563 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 A0A1W2PPM0 123 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 CXorf1O96002 111 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 HNRNPA1P09651 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
VLDLR-202ENST00000382099 ACP7Q6ZNF0 438 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 FA2HQ7L5A8 372 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 OR1L3Q8NH93 324 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 SPTSSAQ969W0 71 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 MAP1LC3CQ9BXW4 147 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 OR2W1Q9Y3N9 320 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 CACNA1EQ15878 2313 aa12.55□□□□□ -0.4
VLDLR-202ENST00000382099 ANKRD30BLA7E2S9 258 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 TMEM150CB9EJG8 249 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 NRN1LQ496H8 165 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 B4GALT7Q9UBV7 327 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 LOC400499M0QZD8 3231 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 MYF5P13349 255 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 TRAT1Q6PIZ9 186 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms