RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 TOMM7Q9P0U1 55 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 DOCK6Q96HP0 2047 aa7.68□□□□□ -1.18
LIMCH1-202ENST00000381753 CD5LO43866 347 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 CST4P01036 141 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 CTSDP07339 412 aaPredicted RBP7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 ADORA2A-AS1P86434 159 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 SPCS2Q15005 226 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 TMEM128Q5BJH2 165 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 VKORC1L1Q8N0U8 176 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 CELF2-AS1Q8N7Q2 184 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 TNFRSF14Q92956 283 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 ALKBH7Q9BT30 221 aaPredicted RBP7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 GSX2Q9BZM3 304 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 ZNF236Q9UL36 1845 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 NDUFB8O95169 186 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 INSP01308 110 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 PRSS1P07477 247 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 GP9P14770 177 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 PRTN3P24158 256 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 KRTDAPP60985 99 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 LINC00303Q3SY05 128 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM216AQ8WUB2 273 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 MESP1Q9BRJ9 268 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 LHFPL6Q9Y693 200 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 C5orf52A6NGY3 159 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 C4orf51C9J302 202 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 RRHO14718 337 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 SIGLEC5O15389 551 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 IGHV3-53P01767 116 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 TTRP02766 147 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 GIPP09681 153 aaPredicted RBP7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 ASIPP42127 132 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 SSBP1Q04837 148 aaKnown RBP7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 IQCJQ1A5X6 159 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 SMUG1Q53HV7 270 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 MBNL3Q9NUK0 354 aaKnown RBP7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 CCL24O00175 119 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 PAX1P15863 534 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 HSPE1P61604 102 aaKnown RBP7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 SCGB1D4Q6XE38 83 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 MMP9P14780 707 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 TAS2R60P59551 318 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 FCN2Q15485 313 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 FAAP20Q6NZ36 180 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 C19orf24Q9BVV8 132 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 GABARAPL3Q9BY60 117 aa7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 NKX6-2Q9C056 277 aaPredicted RBP7.67□□□□□ -1.18
LIMCH1-202ENST00000381753 CD7P09564 240 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 LINC00271P0C7V0 271 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 DLK1P80370 383 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 NRARPQ7Z6K4 114 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 OR2D3Q8NGH3 330 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 SLC25A32Q9H2D1 315 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 FGF20Q9NP95 211 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 TRGV11A0A075B6L2 103 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 TRAV1-2A0A0B4J238 106 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 A0A1W2PPQ1 181 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 TMEM127O75204 238 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 IFI6P09912 130 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 CFHR2P36980 270 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 HNRNPA3P51991 378 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 DAZAP2Q15038 168 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 VAMP3Q15836 100 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 DLEC1Q9Y238 1755 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 OR4C5Q8NGB2 326 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 OR13C6PQ8NH95 151 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 CIDEAO60543 219 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 IGHV1-8P0DP01 117 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 PRCDQ00LT1 54 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 TMEM252Q8N6L7 170 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 OR5H6Q8NGV6 325 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 OR51M1Q9H341 326 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 SIPA1L3O60292 1781 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 TUBGCP6Q96RT7 1819 aa7.66□□□□□ -1.18
LIMCH1-202ENST00000381753 A0A0A6YYJ9 748 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 MELTFP08582 738 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 CD37P11049 281 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 AQP10Q96PS8 301 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 KCNK15Q9H427 330 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 HSPB7Q9UBY9 170 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A10PA6NDY2 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A18PA6NE21 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A16PA6NEW6 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A20PA6NIJ5 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A8PA6NJQ4 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A7PA6NKC0 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A22PA8MWA6 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A12PA8MX19 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A5PA8MXJ8 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A23PA8MXZ1 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A15PP0C7V4 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A13PP0C7W8 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A14PP0C7W9 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 FAM90A24PP0C7X0 464 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 TRGC1P0CF51 173 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 EVI2AP22794 236 aa7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 ZNF660Q6AZW8 331 aaPredicted RBP7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 HDHD3Q9BSH5 251 aaPredicted RBP7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 NXT2Q9NPJ8 142 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-202ENST00000381753 CCKARP32238 428 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms