RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 TEX50A0A1B0GTY4 177 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 hCG_1809904A0A1W2PP81 198 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 A0A1W2PPE2 198 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 A0A1W2PR64 198 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 A0A1W2PRV1 198 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 NUPL2O15504 423 aaKnown RBP12.21□□□□□ -0.45
SNX2-201ENST00000379516 LIPFP07098 398 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 NPY1RP25929 384 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 ZNF726P1Q15940 193 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 HAGHQ16775 308 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 ACSM6Q6P461 480 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 LCN15Q6UWW0 184 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 SLC24A4Q8NFF2 622 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 CLEC7AQ9BXN2 247 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 PLEKHA3Q9HB20 300 aa12.21□□□□□ -0.45
SNX2-201ENST00000379516 SPTBN1Q01082 2364 aaKnown RBP12.21□□□□□ -0.46
SNX2-201ENST00000379516 C22orf46C9J442 243 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 SNAPINO95295 136 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 RBP4P02753 201 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 MDKP21741 143 aaPredicted RBP12.2□□□□□ -0.46
SNX2-201ENST00000379516 COX7A1P24310 79 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 RAB13P51153 203 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 PRCDQ00LT1 54 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 HLA-DRB5Q30154 266 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 SSX7Q7RTT5 188 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 LY6G5BQ8NDX9 201 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 RCC1LQ96I51 464 aaKnown RBP12.2□□□□□ -0.46
SNX2-201ENST00000379516 PATZ1Q9HBE1 687 aaKnown RBP12.2□□□□□ -0.46
SNX2-201ENST00000379516 KPTNQ9Y664 436 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 TRAV1-1A0A0B4J248 108 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 PRSS46E5RG02 174 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 C17orf112F2Z3M2 114 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 ENSAO43768 121 aaKnown RBP12.2□□□□□ -0.46
SNX2-201ENST00000379516 NDUFS7O75251 213 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 CA2P00918 260 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 IGLV1-47P01700 117 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 MC5RP33032 325 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 FFAR4Q5NUL3 377 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 MBD3L1Q8WWY6 194 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 GGACTQ9BVM4 153 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 SLC35B3Q9H1N7 401 aa12.2□□□□□ -0.46
SNX2-201ENST00000379516 IGHV3-72A0A0B4J1Y9 119 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 BUB1B-PAK6H3BSN5 160 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 DNASE2O00115 360 aaPredicted RBP12.19□□□□□ -0.46
SNX2-201ENST00000379516 IGKV1D-33P01593 117 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 IGKV1-33P01594 117 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 PLA2G5P39877 138 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 NPBWR1P48145 328 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 FGF8P55075 233 aaPredicted RBP12.19□□□□□ -0.46
SNX2-201ENST00000379516 RPP25LQ8N5L8 163 aaKnown RBP12.19□□□□□ -0.46
SNX2-201ENST00000379516 OR5B3Q8NH48 314 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 SSBP3Q9BWW4 388 aaPredicted RBP12.19□□□□□ -0.46
SNX2-201ENST00000379516 COMMD5Q9GZQ3 224 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 WDR83OSQ9Y284 106 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 TET2Q6N021 2002 aaPredicted RBP12.19□□□□□ -0.46
SNX2-201ENST00000379516 FAM74A7A6NL05 159 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 A6NNC1 897 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 EIF3GO75821 320 aaKnown RBP eCLIP12.19□□□□□ -0.46
SNX2-201ENST00000379516 MBP02144 154 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 OR13C7P0DN81 318 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 IGFBP2P18065 325 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 GPR6P46095 362 aaPredicted RBP12.19□□□□□ -0.46
SNX2-201ENST00000379516 ARF6P62330 175 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 RPL8P62917 257 aaKnown RBP12.19□□□□□ -0.46
SNX2-201ENST00000379516 FAM74A3Q4VXF1 159 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 BEND2Q8NDZ0 799 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 CLDND2Q8NHS1 167 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 VSTM2AQ8TAG5 236 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 SMDT1Q9H4I9 107 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 SLC39A9Q9NUM3 307 aa12.19□□□□□ -0.46
SNX2-201ENST00000379516 TSPAN4O14817 238 aa12.18□□□□□ -0.46
SNX2-201ENST00000379516 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
SNX2-201ENST00000379516 DLK1P80370 383 aa12.18□□□□□ -0.46
SNX2-201ENST00000379516 TREML4Q6UXN2 200 aa12.18□□□□□ -0.46
SNX2-201ENST00000379516 PNKDQ8N490 385 aa12.18□□□□□ -0.46
SNX2-201ENST00000379516 OR10G4Q8NGN3 311 aa12.18□□□□□ -0.46
SNX2-201ENST00000379516 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
SNX2-201ENST00000379516 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
SNX2-201ENST00000379516 GNG13Q9P2W3 67 aa12.18□□□□□ -0.46
SNX2-201ENST00000379516 INSIG2Q9Y5U4 225 aa12.18□□□□□ -0.46
SNX2-201ENST00000379516 LOC105371242A0A075B767 164 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 MAP1LC3B2A6NCE7 125 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 IGLV2-23P01705 113 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 OR4A5Q8NH83 315 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 TMEM167AQ8TBQ9 72 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 RXFP4Q8TDU9 374 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 RITA1Q96K30 269 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 MAP1LC3BQ9GZQ8 125 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 ACACBO00763 2458 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 ICAM4Q14773 271 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 ZNF506Q5JVG8 444 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 MOB3BQ86TA1 216 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 Q8N7P7 452 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 CLRN3Q8NCR9 226 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 OR10W1Q8NGF6 305 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 OR4P4Q8NGL7 312 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 NPVFQ9HCQ7 196 aa12.17□□□□□ -0.46
SNX2-201ENST00000379516 NDUFA4L2Q9NRX3 87 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms