RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 OPN1MWP04001 364 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 OPN1MW2P0DN77 364 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 OPN1MW3P0DN78 364 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 HOXA5P20719 270 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 OMGP23515 440 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 S100A2P29034 98 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 ERVK11-1P61568 191 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 FABP9Q0Z7S8 132 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 HERPUD1Q15011 391 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 PDCD1Q15116 288 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 TMEM41BQ5BJD5 291 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 C9orf139Q6ZV77 190 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 WDR86Q86TI4 376 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 FAM90A1Q86YD7 464 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 LILRB2Q8N423 598 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 FAM24BQ8N5W8 94 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 ZNF645Q8N7E2 425 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 C22orf15Q8WYQ4 148 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 PARP12Q9H0J9 701 aaKnown RBP8.49□□□□□ -1.05
COL5A1-202ENST00000371820 MAGT1Q9H0U3 335 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 SLC39A9Q9NUM3 307 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 CTSZQ9UBR2 303 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 MGAM2Q2M2H8 2515 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 IGKV1D-13A0A0B4J2D9 117 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 IGKV1-6A0A0C4DH72 117 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 SEC14L6B5MCN3 397 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 TMEM250H0YL14 139 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 DVL1O14640 695 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 TNFRSF13BO14836 293 aaPredicted RBP8.48□□□□□ -1.05
COL5A1-202ENST00000371820 RAB29O14966 203 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 CYB5BO43169 146 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 WIPF1O43516 503 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 NDUFB3O43676 98 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 SYNGR1O43759 233 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 CST7O76096 145 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 NXPH2O95156 264 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 PGA5P0DJD9 388 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 IGKV1-13P0DP09 117 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 EGR1P18146 543 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 PPP1CCP36873 323 aaKnown RBP8.48□□□□□ -1.05
COL5A1-202ENST00000371820 CEACAM6P40199 344 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 RPS10P46783 165 aaKnown RBP8.48□□□□□ -1.05
COL5A1-202ENST00000371820 CDX1P47902 265 aaPredicted RBP8.48□□□□□ -1.05
COL5A1-202ENST00000371820 PSMB3P49720 205 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 DLK1P80370 383 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 ICAM4Q14773 271 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 LRRC10Q5BKY1 277 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 KLF17Q5JT82 389 aaPredicted RBP8.48□□□□□ -1.05
COL5A1-202ENST00000371820 C11orf53Q8IXP5 236 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 SIGLECL1Q8N7X8 197 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 C3orf56Q8N813 242 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 ZNF709Q8N972 641 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 OR51H1Q8NH63 302 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 C2CD4CQ8TF44 421 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 AGMATQ9BSE5 352 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 MANBALQ9NQG1 85 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 WNK2Q9Y3S1 2297 aa8.48□□□□□ -1.05
COL5A1-202ENST00000371820 IGHV3OR15-7A0A075B7D8 119 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 A0A1W2PPH5 198 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 SMCO3A2RU48 225 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 C22orf46C9J442 243 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 TOX4O94842 621 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 OR2H2O95918 312 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 BCL2P10415 239 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 PSG2P11465 335 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 GZMHP20718 246 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 PRTN3P24158 256 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 FHITP49789 147 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 RND2P52198 227 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 PAX5Q02548 391 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 KIAA0141Q14154 515 aaPredicted RBP8.47□□□□□ -1.05
COL5A1-202ENST00000371820 SSX2Q16385 188 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 ZFP82Q8N141 532 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 FGFRL1Q8N441 504 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 SCCPDHQ8NBX0 429 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 OR10P1Q8NGE3 313 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 SGMS2Q8NHU3 365 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 EDARADDQ8WWZ3 215 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 ANAPC16Q96DE5 110 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 HSD17B10Q99714 261 aaKnown RBP8.47□□□□□ -1.05
COL5A1-202ENST00000371820 RARRES2Q99969 163 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 PCGF1Q9BSM1 259 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 GGACTQ9BVM4 153 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 ACTR3CQ9C0K3 210 aaPredicted RBP8.47□□□□□ -1.05
COL5A1-202ENST00000371820 WDR61Q9GZS3 305 aaKnown RBP8.47□□□□□ -1.05
COL5A1-202ENST00000371820 NCOR1P1Q9H4R4 102 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 ESM1Q9NQ30 184 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 ZNF581Q9P0T4 197 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 CACNG5Q9UF02 275 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 MEGF8Q7Z7M0 2845 aa8.47□□□□□ -1.05
COL5A1-202ENST00000371820 TRBV24-1A0A075B6N3 115 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 DNAJC9-AS1A6NH13 148 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 SLC33A1O00400 549 aaPredicted RBP8.46□□□□□ -1.06
COL5A1-202ENST00000371820 HMGB3O15347 200 aaKnown RBP8.46□□□□□ -1.06
COL5A1-202ENST00000371820 MPDU1O75352 247 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 IGHV4-38-2P0DP08 117 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 HTD2P86397 168 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 FOXL1Q12952 345 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 HAGHQ16775 308 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 STUMQ69YW2 141 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms