RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 H1FXQ92522 213 aaKnown RBP7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 STARD4Q96DR4 205 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 SFRP2Q96HF1 295 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 ZDHHC11Q9H8X9 412 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 TRAV30A0A087WSZ9 112 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 TRAV38-1A0A0B4J264 116 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 TMPRSS2O15393 492 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 VDAC1P21796 283 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 PAFAH1B2P68402 229 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 Q0VG73 95 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 ZNF585BQ52M93 769 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 H2BFWTQ7Z2G1 175 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 OR4C5Q8NGB2 326 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 OR4B1Q8NGF8 309 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 MRPL27Q9P0M9 148 aaKnown RBP7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 COLQQ9Y215 455 aaPredicted RBP7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 KMT2EQ8IZD2 1858 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 OR7C2O60412 319 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 CA2P00918 260 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 HNRNPA3P51991 378 aaKnown RBP7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 PPP1CBP62140 327 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 ZNF441Q8N8Z8 693 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 SMRP1Q8NCR6 262 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 OR52L2PQ8NGH6 319 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 VPS25Q9BRG1 176 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 TECRQ9NZ01 308 aaKnown RBP7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 ZNF391Q9UJN7 358 aa7.32□□□□□ -1.24
SMARCA1-203ENST00000371123 IGKV3D-11A0A0A0MRZ8 115 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 CRISP2P16562 243 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 OTX1P32242 354 aaPredicted RBP7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 TIMP3P35625 211 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 LGALS4P56470 323 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 MPV17L2Q567V2 206 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 AMMECR1LQ6DCA0 310 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 SLC35E4Q6ICL7 350 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 PP6455Q8WZ26 134 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 URB1-AS1Q96HZ7 61 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 COL12A1Q99715 3063 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 IFNA1P01562 189 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 KITLGP21583 273 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 RND1Q92730 232 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 BCL2L2Q92843 193 aaPredicted RBP7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 CLDN23Q96B33 292 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 SFXN3Q9BWM7 321 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 IL36GQ9NZH8 169 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 CLCF1Q9UBD9 225 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 MRPS16Q9Y3D3 137 aaKnown RBP7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 LOXL2Q9Y4K0 774 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 DMXL2Q8TDJ6 3036 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 TNFSF4P23510 183 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 CTSSP25774 331 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 NTF4P34130 210 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 PSMB3P49720 205 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 PRSS57Q6UWY2 283 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 SCCPDHQ8NBX0 429 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 ZNF439Q8NDP4 499 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 SLC24A4Q8NFF2 622 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 ZDHHC16Q969W1 377 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 ZNF835Q9Y2P0 537 aa7.31□□□□□ -1.24
SMARCA1-203ENST00000371123 PTPRBP23467 1997 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 SCO2A0A1W2PP80 73 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 GJE1A6NN92 205 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 H0YJW9 148 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 IER3P46695 156 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 RANP62826 216 aaKnown RBP7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 OR8B8Q15620 311 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 TSKUQ8WUA8 353 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 MOB1AQ9H8S9 216 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 ANKHD1Q8IWZ3 2542 aaKnown RBP7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 IGHV1-69-2A0A0G2JMI3 117 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 A0A1W2PQD3 144 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 C11orf94C9JXX5 98 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 M0R1X1 148 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 VENTXO95231 258 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 PCBD1P61457 104 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 ZNF90Q03938 601 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 SLC38A11Q08AI6 406 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 FAM120AOSQ5T036 256 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 GDF5OSQ5U4N7 250 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 OR2Z1Q8NG97 314 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 C5orf30Q96GV9 206 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 C1orf159Q96HA4 380 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 TXN2Q99757 166 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 MEGF9Q9H1U4 602 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 TET2Q6N021 2002 aaPredicted RBP7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 PIEZO1Q92508 2521 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 CIDEAO60543 219 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 OR10J4P0C629 311 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 SRD5A2P31213 254 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 CAMPP49913 170 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 FUT6P51993 359 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 PRRX1P54821 245 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 HBG1P69891 147 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 HBG2P69892 147 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 SERF2P84101 59 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 OR1C1Q15619 314 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 LINC00173Q6ZV60 143 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 FAM58AQ8N1B3 248 aa7.3□□□□□ -1.24
SMARCA1-203ENST00000371123 ZCCHC24Q8N2G6 241 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms