RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 IFI27L2Q9H2X8 130 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 OR51J1Q9H342 316 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 LPAR2Q9HBW0 351 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 SLC2A9Q9NRM0 540 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ONECUT1Q9UBC0 465 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 FOXA2Q9Y261 457 aaPredicted RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 CBY1Q9Y3M2 126 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 CRYM-AS1A6NIL9 109 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 WRBO00258 174 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 GPR31O00270 319 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ITGB1BP1O14713 200 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 TNFSF12O43508 249 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 SFT2D2O95562 160 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 RBP4P02753 201 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 NKX2-1P43699 371 aaPredicted RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 CDX1P47902 265 aaPredicted RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 NPBWR1P48145 328 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 BRWD1-AS2P59051 145 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 RND3P61587 244 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 RPL30P62888 115 aaKnown RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 CD300CQ08708 224 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 DHRS2Q13268 280 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 DIAPH2-AS1Q14236 149 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 FCN2Q15485 313 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 SLC9A3R2Q15599 337 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 TMEM30BQ3MIR4 351 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 SP6Q3SY56 376 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ABCA11PQ4W5N1 156 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 RPL39P5Q59GN2 51 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 TMEM128Q5BJH2 165 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 PAPPA-AS1Q5QFB9 102 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 LDLRAD2Q5SZI1 272 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ZNF626Q68DY1 528 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 LPCAT3Q6P1A2 487 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 FAHD2BQ6P2I3 314 aaPredicted RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 PRSS57Q6UWY2 283 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 BTNL3Q6UXE8 466 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 SLC25A48Q6ZT89 311 aaKnown RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 LYG2Q86SG7 212 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 TCTE3Q8IZS6 198 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ABHD12Q8N2K0 398 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 LINC00311Q8N616 119 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 MAPK1IP1LQ8NDC0 245 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 WFDC11Q8NEX6 87 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 OR5R1Q8NH85 324 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ZNF596Q8TC21 504 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ZNF431Q8TF32 576 aaPredicted RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 RTN4IP1Q8WWV3 396 aaPredicted RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 TNFRSF14Q92956 283 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 RAB39BQ96DA2 213 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 FAHD2AQ96GK7 314 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 TP53RKQ96S44 253 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 TBX15Q96SF7 602 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 REG4Q9BYZ8 158 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 OR2D2Q9H210 308 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 TMEM133Q9H2Q1 129 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 NAA60Q9H7X0 242 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 MAP6D1Q9H9H5 199 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 SDHAF2Q9NX18 166 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 C14orf166Q9Y224 244 aaKnown RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 RBM7Q9Y580 266 aaKnown RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 TNFRSF18Q9Y5U5 241 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 CR1P17927 2039 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 FLNAP21333 2647 aaKnown RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 IGHV2-26A0A0B4J1V2 119 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 TEX13DA0A0J9YY54 714 aaPredicted RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 A0A0U1RRA0 63 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 SNRPGP15A8MWD9 76 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 F8W036 122 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 M0R1W7 72 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 ENSAO43768 121 aaKnown RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 CLN5O75503 358 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 FOXH1O75593 365 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 IGLV1-47P01700 117 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 HLA-AP01891 365 aaKnown RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 OR5AC1P0C628 307 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 SULT1A3P0DMM9 295 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 SULT1A4P0DMN0 295 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 CXCL3P19876 107 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 PRTN3P24158 256 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 COX7A1P24310 79 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 CD34P28906 385 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 DVL1P1P54792 670 aaPredicted RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 TAS2R31P59538 309 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 PAX8Q06710 450 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 LOXL1Q08397 574 aaPredicted RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 KLRD1Q13241 179 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 TMEM187Q14656 261 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 NCR3LG1Q68D85 454 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 VMO1Q7Z5L0 202 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 LYG1Q8N1E2 194 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 PNKDQ8N490 385 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 C12orf45Q8N5I9 185 aaPredicted RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 KIR3DL3Q8N743 410 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 ZNF645Q8N7E2 425 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 C8orf31Q8N9H6 132 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 SLC24A4Q8NFF2 622 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 OR11H7Q8NGC8 314 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 CASTOR1Q8WTX7 329 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 GLYATL2Q8WU03 294 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms