RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 IGLV2-23P01705 113 aa16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 CD1BP29016 333 aa16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 HABP2Q14520 560 aaPredicted RBP16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 VMA21Q3ZAQ7 101 aa16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 FAM74A1Q5RGS3 127 aa16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 HSD17B13Q7Z5P4 300 aaPredicted RBP16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 TMED6Q8WW62 240 aa16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 RNF5Q99942 180 aa16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 SMIM3Q9BZL3 60 aa16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 FKBP11Q9NYL4 201 aa16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 NUP50Q9UKX7 468 aa16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 ZNF257Q9Y2Q1 563 aa16.9■□□□□ 0.3
MAP1LC3A-201ENST00000360668 A0A1W2PRD5 423 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 A0A1W2PRF3 423 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 A0A1W2PRM7 423 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 NUDT19A8MXV4 375 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 TIMM23O14925 209 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 SULT1A1P50225 295 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 HSPE1P61604 102 aaKnown RBP16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 PRSS57Q6UWY2 283 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 STX12Q86Y82 276 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 TMEM167AQ8TBQ9 72 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 ZDHHC16Q969W1 377 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 CXorf58Q96LI9 332 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 TCF19Q9Y242 345 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 HILPDAQ9Y5L2 63 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 VPS13CQ709C8 3753 aa16.89■□□□□ 0.3
MAP1LC3A-201ENST00000360668 H3BP45 60 aa16.89■□□□□ 0.29
MAP1LC3A-201ENST00000360668 FGF2P09038 288 aa16.89■□□□□ 0.29
MAP1LC3A-201ENST00000360668 SULT1A2P50226 295 aa16.89■□□□□ 0.29
MAP1LC3A-201ENST00000360668 LOXL1Q08397 574 aaPredicted RBP16.89■□□□□ 0.29
MAP1LC3A-201ENST00000360668 AANATQ16613 207 aa16.89■□□□□ 0.29
MAP1LC3A-201ENST00000360668 CLEC9AQ6UXN8 241 aa16.89■□□□□ 0.29
MAP1LC3A-201ENST00000360668 CFHR4Q92496 578 aa16.89■□□□□ 0.29
MAP1LC3A-201ENST00000360668 OR51B2Q9Y5P1 312 aa16.89■□□□□ 0.29
MAP1LC3A-201ENST00000360668 TRAV20A0A0B4J274 112 aa16.88■□□□□ 0.29
MAP1LC3A-201ENST00000360668 DFFBO76075 338 aa16.88■□□□□ 0.29
MAP1LC3A-201ENST00000360668 SPANXN5Q5MJ07 72 aa16.88■□□□□ 0.29
MAP1LC3A-201ENST00000360668 Q5PR19 223 aa16.88■□□□□ 0.29
MAP1LC3A-201ENST00000360668 STPG2Q8N412 459 aa16.88■□□□□ 0.29
MAP1LC3A-201ENST00000360668 MALSU1Q96EH3 234 aa16.88■□□□□ 0.29
MAP1LC3A-201ENST00000360668 CLCC1Q96S66 551 aa16.88■□□□□ 0.29
MAP1LC3A-201ENST00000360668 TSNAXQ99598 290 aaKnown RBP16.88■□□□□ 0.29
MAP1LC3A-201ENST00000360668 CST7O76096 145 aa16.87■□□□□ 0.29
MAP1LC3A-201ENST00000360668 GATA3P23771 443 aa16.87■□□□□ 0.29
MAP1LC3A-201ENST00000360668 RAB5CP51148 216 aa16.87■□□□□ 0.29
MAP1LC3A-201ENST00000360668 BLOC1S1P78537 153 aa16.87■□□□□ 0.29
MAP1LC3A-201ENST00000360668 SPINK9Q5DT21 86 aa16.87■□□□□ 0.29
MAP1LC3A-201ENST00000360668 TMEM14EPQ6UXP3 125 aa16.87■□□□□ 0.29
MAP1LC3A-201ENST00000360668 TEX45Q8NA69 505 aa16.87■□□□□ 0.29
MAP1LC3A-201ENST00000360668 OR1S2Q8NGQ3 325 aa16.87■□□□□ 0.29
MAP1LC3A-201ENST00000360668 RITA1Q96K30 269 aa16.87■□□□□ 0.29
MAP1LC3A-201ENST00000360668 CENPVL3A0A0U1RRI6 287 aa16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 SCAF4O95104 1147 aaKnown RBP16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 VENTXO95231 258 aa16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 SPP1P10451 314 aa16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 VDAC2P45880 294 aaPredicted RBP16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 RPL8P62917 257 aaKnown RBP16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 TMEM267Q0VDI3 215 aaPredicted RBP16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 SSX2Q16385 188 aa16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 LINC01356Q8N9X3 169 aa16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 OR5B3Q8NH48 314 aa16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 HIPK2Q9H2X6 1198 aa16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 STRAPQ9Y3F4 350 aaKnown RBP16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 TET2Q6N021 2002 aaPredicted RBP16.86■□□□□ 0.29
MAP1LC3A-201ENST00000360668 NPFFO15130 113 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 SLC25A17O43808 307 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 DYNLT3P51808 116 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 OR5C1Q8NGR4 320 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 OR4C12Q96R67 309 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 TEX50A0A1B0GTY4 177 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 CRYGBP07316 175 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 METTL15P1P0C7V9 234 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 HOXA1P49639 335 aaPredicted RBP16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 RPP30P78346 268 aaKnown RBP16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 PRCDQ00LT1 54 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 PSG5Q15238 335 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 DYNAPQ8N1N2 210 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 MARC2Q969Z3 335 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 AJUBAQ96IF1 538 aa16.85■□□□□ 0.29
MAP1LC3A-201ENST00000360668 RAB19A4D1S5 217 aa16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 SAA4P35542 130 aa16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 HBG1P69891 147 aa16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 HBG2P69892 147 aa16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 TMEM217Q8N7C4 229 aa16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 GNPNAT1Q96EK6 184 aaPredicted RBP16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 ATP5SQ99766 215 aa16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 ENY2Q9NPA8 101 aa16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 HEYLQ9NQ87 328 aaPredicted RBP16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 PARP11Q9NR21 331 aa16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 HIF1ANQ9NWT6 349 aa16.84■□□□□ 0.29
MAP1LC3A-201ENST00000360668 ZNF705EA8MWA4 302 aaPredicted RBP16.83■□□□□ 0.28
MAP1LC3A-201ENST00000360668 FBXO24O75426 580 aa16.83■□□□□ 0.28
MAP1LC3A-201ENST00000360668 MOSP00540 346 aa16.83■□□□□ 0.28
MAP1LC3A-201ENST00000360668 MYOD1P15172 320 aa16.83■□□□□ 0.28
MAP1LC3A-201ENST00000360668 CLINT1Q14677 625 aa16.83■□□□□ 0.28
MAP1LC3A-201ENST00000360668 LURAP1LQ8IV03 231 aa16.83■□□□□ 0.28
MAP1LC3A-201ENST00000360668 OR1L8Q8NGR8 309 aa16.83■□□□□ 0.28
MAP1LC3A-201ENST00000360668 C17orf50Q8WW18 174 aa16.83■□□□□ 0.28
MAP1LC3A-201ENST00000360668 COMMD5Q9GZQ3 224 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms