RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 MMP26Q9NRE1 261 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 IGHV2-26A0A0B4J1V2 119 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 A0A0U1RQK1 487 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 LINC00862A6NCI5 91 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 KBTBD11O94819 623 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 FGF2P09038 288 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 PRB4P10163 310 aaPredicted RBP9.07□□□□□ -0.96
SVIP-201ENST00000354193 MLANAQ16655 118 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 SOHLH1Q5JUK2 328 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 TEX36Q5VZQ5 186 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 C1orf229Q6ZS94 237 aaPredicted RBP9.07□□□□□ -0.96
SVIP-201ENST00000354193 WASHC3Q9Y3C0 194 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 SORL1Q92673 2214 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 A6NNC1 897 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 RNASEK-C17orf49H0YIS7 233 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 TOX4O94842 621 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 GAPDHP04406 335 aaKnown RBP9.07□□□□□ -0.96
SVIP-201ENST00000354193 FBP1P09467 338 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 SPCS3P61009 180 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 HSPE1P61604 102 aaKnown RBP9.07□□□□□ -0.96
SVIP-201ENST00000354193 CLEC12BQ2HXU8 276 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 OR4C13Q8NGP0 309 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 ZNF596Q8TC21 504 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 FAM168AQ92567 244 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 RPUSD4Q96CM3 377 aaKnown RBP9.07□□□□□ -0.96
SVIP-201ENST00000354193 NPIPB11E5RHQ5 1161 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 HSPB1P04792 205 aaKnown RBP9.07□□□□□ -0.96
SVIP-201ENST00000354193 HNF1AP20823 631 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 EFNB3Q15768 340 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 RPRMQ9NS64 109 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 URGCP-MRPS24S4R325 110 aa9.07□□□□□ -0.96
SVIP-201ENST00000354193 FN1P02751 2386 aaKnown RBP9.07□□□□□ -0.96
SVIP-201ENST00000354193 TMEM8BA6NDV4 472 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 PITX3O75364 302 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 CNTFRP26992 372 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 MIC13Q5XKP0 118 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 C19orf35Q6ZS72 473 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 SH2D7A6NKC9 451 aaPredicted RBP9.06□□□□□ -0.96
SVIP-201ENST00000354193 TIMM23O14925 209 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 OR7C2O60412 319 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 CA2P00918 260 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 IGKV1D-33P01593 117 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 IGKV1-33P01594 117 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 KIR2DS2P43631 304 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 IL15RAQ13261 267 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 PEA15Q15121 130 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 LY6EQ16553 131 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 BRD3OSQ6XYD6 125 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 TCF23Q7RTU1 214 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 SLC35E1Q96K37 410 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 TMEM147Q9BVK8 224 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 VSIRQ9H7M9 311 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 SRRM4A7MD48 611 aaKnown RBP9.06□□□□□ -0.96
SVIP-201ENST00000354193 KRBOX1C9JBD0 128 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 CD1BP29016 333 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 GCSAMLQ5JQS6 135 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 HIST2H2BCQ6DN03 193 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 SLC25A48Q6ZT89 311 aaKnown RBP9.06□□□□□ -0.96
SVIP-201ENST00000354193 OR10G4Q8NGN3 311 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 OR10G9Q8NGN4 311 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 OR10G7Q8NGN6 311 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 TMEM186Q96B77 213 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 MAP1LC3B2A6NCE7 125 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 PAX9P55771 341 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 OR1L8Q8NGR8 309 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 TAF15Q92804 592 aaKnown RBP eCLIP9.06□□□□□ -0.96
SVIP-201ENST00000354193 RARRES2Q99969 163 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 MAP1LC3BQ9GZQ8 125 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 CACFD1Q9UGQ2 172 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 PRNDQ9UKY0 176 aa9.06□□□□□ -0.96
SVIP-201ENST00000354193 C17orf112F2Z3M2 114 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 SFTA3P0C7M3 94 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 SULT1A2P50226 295 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 EFNA4P52798 201 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 FAM216AQ8WUB2 273 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 TMPRSS5Q9H3S3 457 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 AURKAIP1Q9NWT8 199 aaPredicted RBP9.05□□□□□ -0.96
SVIP-201ENST00000354193 TAS2R30P59541 319 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 SRSF4Q08170 494 aaKnown RBP9.05□□□□□ -0.96
SVIP-201ENST00000354193 TMEM155Q4W5P6 130 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 ARV1Q9H2C2 271 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 SEC11BP0C7V7 166 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 CEACAM3P40198 252 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 FBXL19-AS1Q494R0 122 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 TPSG1Q9NRR2 321 aa9.05□□□□□ -0.96
SVIP-201ENST00000354193 IGHV3OR16-8A0A075B7F1 116 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 UMAD1C9J7I0 102 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 SCAF4O95104 1147 aaKnown RBP9.04□□□□□ -0.96
SVIP-201ENST00000354193 RBP4P02753 201 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 ORM2P19652 201 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 SMIM8Q96KF7 97 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 AIFM2Q9BRQ8 373 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 TRBV23-1A0A0A0MS06 115 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 CCL20P78556 96 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 GUCA2BQ16661 112 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 DPM3Q9P2X0 92 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 LINC00527Q9UJ94 153 aa9.04□□□□□ -0.96
SVIP-201ENST00000354193 RPL27AP46776 148 aaKnown RBP9.04□□□□□ -0.96
SVIP-201ENST00000354193 BRWD1-AS2P59051 145 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms