RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SERPINE1P05121 402 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ATP5G1P05496 136 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 SOD3P08294 240 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 RBP1P09455 135 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ESDP10768 282 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 IDO1P14902 403 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 HIST1H1CP16403 213 aaKnown RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 RPS3P23396 243 aaKnown RBP eCLIP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 MAP2K4P45985 399 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CAPZBP47756 277 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 RAB5CP51148 216 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 NCS1P62166 190 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 GNA12Q03113 381 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 PTGES3Q15185 160 aaKnown RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CLLU1OSQ5K130 101 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 C1orf195Q5TG92 126 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 C3orf33Q6P1S2 294 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 EBLN2Q6P2I7 272 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 WDR59Q6PJI9 974 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 FA2HQ7L5A8 372 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF720Q7Z2F6 126 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 PDZD9Q8IXQ8 264 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ASB13Q8WXK3 278 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 POP5Q969H6 163 aaKnown RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM203Q969S6 136 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 RAD51AP1Q96B01 352 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 DCUN1D1Q96GG9 259 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 PPP1R2P1Q96PQ5 205 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 HBEGFQ99075 208 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 DPY30Q9C005 99 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 FXYD6Q9H0Q3 95 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 OR51B6Q9H340 312 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF355PQ9NSJ1 428 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ARMC1Q9NVT9 282 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 TAS2R7Q9NYW3 318 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CCDC167Q9P0B6 97 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 RBM7Q9Y580 266 aaKnown RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 LRBAP50851 2863 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 TP53BP1Q12888 1972 aaPredicted RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 GBF1Q92538 1859 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 DDX60Q8IY21 1712 aaKnown RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 DAPK1P53355 1430 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 DSPP15924 2871 aaKnown RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CHD9Q3L8U1 2897 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 DHRS12A0PJE2 317 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 IRGMA1A4Y4 181 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 NKX2-6A6NCS4 301 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 LRRN3E7EW58 273 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 F8W036 122 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 H3BSA7 217 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 J3QRK9 145 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 K7EPK0 472 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 BHLHE40O14503 412 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 SLC22A1O15245 554 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 IFNGP01579 166 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 IL7P13232 177 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 HOXB6P17509 224 aaKnown RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 SLC18A1P54219 525 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CAV3P56539 151 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CTBP2P56545 445 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 RAB4BP61018 213 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CXCR4P61073 352 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 REEP5Q00765 189 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 PDGFRLQ15198 375 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 UBE2NLQ5JXB2 153 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 C6orf52Q5T4I8 152 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 LAMTOR1Q6IAA8 161 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 OR10K2Q6IF99 312 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 SFXN4Q6P4A7 337 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF705AQ6ZN79 300 aaPredicted RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 FAM19A5Q7Z5A7 132 aaPredicted RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 GID4Q8IVV7 300 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 C12orf45Q8N5I9 185 aaPredicted RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 REEP6Q96HR9 211 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 METTL9Q9H1A3 318 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 NIT2Q9NQR4 276 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 HDGFL3Q9Y3E1 203 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 TIMM8BQ9Y5J9 83 aaPredicted RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 KIF25-AS1Q9Y6Z4 181 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 USP42Q9H9J4 1324 aaKnown RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 PKD1L1Q8TDX9 2849 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 A0A087X0T9 212 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 A0A096LPI6 279 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 A0A0D9SFI3 127 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 GNG14A0A1W2PPG7 69 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 OR1I1O60431 355 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 GATBO75879 557 aaKnown RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 SLC25A14O95258 325 aaPredicted RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 CXorf1O96002 111 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 UCHL1P09936 223 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 GTF2F2P13984 249 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ORM2P19652 201 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 CELP19835 753 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 CRABP2P29373 138 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 CASP1P29466 404 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 IDH3GP51553 393 aaPredicted RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 SMIM11AP58511 58 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 RUNX1Q01196 453 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 RELAQ04206 551 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms