RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 F2RP25116 425 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 ARF6P62330 175 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 RPL30P62888 115 aaKnown RBP11.97□□□□□ -0.49
CXCL12-201ENST00000343575 PNRC1Q12796 327 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-201ENST00000343575 KHDC3LQ587J8 217 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 BTNL3Q6UXE8 466 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 ZNF429Q86V71 674 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 CMTM1Q8IZ96 169 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 HSD17B11Q8NBQ5 300 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 OR2G3Q8NGZ4 309 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 ZNF596Q8TC21 504 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 PIGBOS1A0A0B4J2F0 54 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 DUXBA0A1W2PPF3 345 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 NDUFS6O75380 124 aaKnown RBP11.96□□□□□ -0.49
CXCL12-201ENST00000343575 RBP4P02753 201 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 FHITP49789 147 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 DSCR9P59020 149 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 EWSR1Q01844 656 aaKnown RBP eCLIP11.96□□□□□ -0.49
CXCL12-201ENST00000343575 BAXQ07812 192 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 MSMO1Q15800 293 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 RPL39P5Q59GN2 51 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 LRRC75A-AS1Q8N1F1 130 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 OR2C3Q8N628 320 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 OR4D5Q8NGN0 318 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 OR5R1Q8NH85 324 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 FAM216AQ8WUB2 273 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 MBD6Q96DN6 1003 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 PRDM13Q9H4Q3 707 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 POLR3KQ9Y2Y1 108 aaPredicted RBP11.96□□□□□ -0.49
CXCL12-201ENST00000343575 HECTD1Q9ULT8 2610 aa11.96□□□□□ -0.49
CXCL12-201ENST00000343575 LINC00473A8K010 186 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST1H2BKO60814 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST1H2BJP06899 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST1H2BOP23527 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST1H2BBP33778 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST1H2BDP58876 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST1H2BCP62807 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 DLK1P80370 383 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST2H2BEQ16778 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST3H2BBQ8N257 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 C8orf31Q8N9H6 132 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 ZBTB34Q8NCN2 500 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 OR10D4PQ8NGN7 298 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 OR51H1Q8NH63 302 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 Q8WTZ3 238 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST1H2BHQ93079 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 BSCL2Q96G97 398 aaPredicted RBP11.95□□□□□ -0.5
CXCL12-201ENST00000343575 C14orf144Q96I85 54 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST1H2BNQ99877 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HIST1H2BMQ99879 126 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 TMEM222Q9H0R3 208 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 SH3BGRL3Q9H299 93 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 TMEM133Q9H2Q1 129 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 ONECUT1Q9UBC0 465 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 GAB2Q9UQC2 676 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 RCL1Q9Y2P8 373 aaKnown RBP11.95□□□□□ -0.5
CXCL12-201ENST00000343575 PDZD2O15018 2839 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 SAA2-SAA4A0A096LPE2 208 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 J3QR06 171 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
CXCL12-201ENST00000343575 SAA2P0DJI9 122 aaPredicted RBP11.95□□□□□ -0.5
CXCL12-201ENST00000343575 UCP1P25874 307 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 RAB7AP51149 207 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 ZNF585BQ52M93 769 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 HCP5Q6MZN7 132 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 SPSB3Q6PJ21 355 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 LYZL2Q7Z4W2 148 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 ABHD12Q8N2K0 398 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 LINC00311Q8N616 119 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 TNFRSF14Q92956 283 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 C11orf1Q9H5F2 150 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 MMP24Q9Y5R2 645 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 SVEP1Q4LDE5 3571 aa11.95□□□□□ -0.5
CXCL12-201ENST00000343575 ITPR2Q14571 2701 aa11.94□□□□□ -0.5
CXCL12-201ENST00000343575 IGHV2-26A0A0B4J1V2 119 aa11.94□□□□□ -0.5
CXCL12-201ENST00000343575 IGHV2-70DA0A0C4DH43 119 aa11.94□□□□□ -0.5
CXCL12-201ENST00000343575 M0R1W7 72 aa11.94□□□□□ -0.5
CXCL12-201ENST00000343575 ATP6V0CP27449 155 aa11.94□□□□□ -0.5
CXCL12-201ENST00000343575 DDTP30046 118 aa11.94□□□□□ -0.5
CXCL12-201ENST00000343575 GPR12P47775 334 aa11.94□□□□□ -0.5
CXCL12-201ENST00000343575 NHLH2Q02577 135 aa11.94□□□□□ -0.5
CXCL12-201ENST00000343575 RCC1LQ96I51 464 aaKnown RBP11.94□□□□□ -0.5
CXCL12-201ENST00000343575 SIRPDQ9H106 197 aa11.94□□□□□ -0.5
CXCL12-201ENST00000343575 WSB1Q9Y6I7 421 aa11.94□□□□□ -0.5
CXCL12-201ENST00000343575 PRRC2AP48634 2157 aaKnown RBP11.93□□□□□ -0.5
CXCL12-201ENST00000343575 H0Y980 276 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 ENSAO43768 121 aaKnown RBP11.93□□□□□ -0.5
CXCL12-201ENST00000343575 IGKV1-39P01597 117 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 IGLV1-47P01700 117 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 IGKV1D-39P04432 117 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 DUTP33316 252 aaKnown RBP11.93□□□□□ -0.5
CXCL12-201ENST00000343575 RND2P52198 227 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 TAS2R60P59551 318 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 DIAPH2-AS1Q14236 149 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 NCR3LG1Q68D85 454 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 LYG1Q8N1E2 194 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 ST6GALNAC6Q969X2 333 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 TMEM56Q96MV1 263 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms